Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G23820.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT3G23820.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001923.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 99.56 | 99.56 |
| CDY53207 | Canola | endoplasmic reticulum | 99.34 | 99.56 |
| CDX77481 | Canola | endoplasmic reticulum | 94.96 | 95.58 |
| CDX85133 | Canola | endoplasmic reticulum | 94.96 | 94.96 |
| CDY64583 | Canola | endoplasmic reticulum | 95.39 | 94.57 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 95.39 | 94.57 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 94.96 | 94.13 |
| VIT_05s0029g00420.t01 | Wine grape | endoplasmic reticulum | 78.29 | 79.16 |
| KRH58854 | Soybean | endoplasmic reticulum, golgi | 69.96 | 76.68 |
| PGSC0003DMT400053071 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 74.78 | 76.12 |
| KRH31569 | Soybean | mitochondrion | 76.97 | 75.97 |
| KRG97348 | Soybean | endoplasmic reticulum | 72.81 | 75.63 |
| Solyc09g092330.1.1 | Tomato | nucleus | 74.56 | 75.22 |
| PGSC0003DMT400011867 | Potato | cytosol, endoplasmic reticulum, golgi | 73.03 | 73.35 |
| PGSC0003DMT400040718 | Potato | cytosol, endoplasmic reticulum, golgi | 68.2 | 71.66 |
| Solyc05g053790.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 66.45 | 69.98 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 64.69 | 67.82 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 64.47 | 67.59 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 65.13 | 67.04 |
| GSMUA_Achr8P00950_001 | Banana | cytosol, endoplasmic reticulum, golgi | 64.91 | 66.82 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 62.72 | 66.51 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 61.62 | 65.5 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 61.62 | 65.5 |
| GSMUA_Achr8P08790_001 | Banana | endoplasmic reticulum, nucleus, peroxisome | 63.6 | 65.32 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 62.06 | 65.21 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 62.06 | 65.06 |
| KRH42756 | Soybean | extracellular, golgi, plastid | 69.74 | 64.5 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 59.65 | 63.4 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 59.65 | 63.4 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 59.43 | 63.02 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 59.21 | 62.79 |
| GSMUA_Achr7P02740_001 | Banana | endoplasmic reticulum | 65.57 | 61.65 |
| Zm00001d049804_P001 | Maize | plasma membrane | 59.43 | 60.49 |
| TraesCS5B01G280700.1 | Wheat | endoplasmic reticulum | 61.62 | 58.79 |
| Os08t0526100-01 | Rice | plastid | 61.4 | 58.58 |
| EES14210 | Sorghum | cytosol, extracellular, golgi, plastid | 61.18 | 58.25 |
| TraesCS5D01G288700.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 61.4 | 58.21 |
| Zm00001d021026_P001 | Maize | endoplasmic reticulum | 62.06 | 58.11 |
| EER99141 | Sorghum | cytosol, endoplasmic reticulum, golgi, plastid | 62.72 | 57.89 |
| TraesCS5A01G281600.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 60.96 | 57.68 |
| Os09t0504000-01 | Rice | cytosol, endoplasmic reticulum, golgi | 62.94 | 57.63 |
| TraesCS7B01G153900.1 | Wheat | plastid | 62.06 | 57.52 |
| TraesCS7D01G257800.1 | Wheat | plastid | 61.62 | 57.35 |
| TraesCS7A01G256600.1 | Wheat | plastid | 61.62 | 57.35 |
| Zm00001d031577_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome, plastid | 56.36 | 57.11 |
| HORVU7Hr1G053260.2 | Barley | plastid | 61.18 | 56.94 |
| HORVU5Hr1G075660.1 | Barley | plastid | 61.4 | 55.12 |
| CDY47611 | Canola | golgi | 21.05 | 27.59 |
| CDX86828 | Canola | golgi | 20.83 | 27.38 |
| CDY40862 | Canola | cytosol, golgi | 20.83 | 27.38 |
| CDY03506 | Canola | cytosol, golgi | 20.83 | 27.3 |
| CDY47846 | Canola | golgi | 20.39 | 27.11 |
| CDY21065 | Canola | cytosol | 20.83 | 27.07 |
| CDY31278 | Canola | cytosol | 20.83 | 27.07 |
| CDY08378 | Canola | golgi | 20.18 | 26.67 |
| CDY49193 | Canola | cytosol | 20.39 | 26.5 |
| CDY47346 | Canola | cytosol | 20.39 | 26.5 |
| CDY69000 | Canola | cytosol | 19.3 | 26.27 |
| CDY50431 | Canola | cytosol | 19.96 | 26.15 |
| CDY09555 | Canola | mitochondrion | 21.27 | 23.1 |
| CDY02312 | Canola | mitochondrion | 20.83 | 22.62 |
| CDY13102 | Canola | golgi | 20.39 | 22.57 |
| CDY29113 | Canola | golgi | 20.18 | 22.33 |
| CDY49498 | Canola | golgi | 20.18 | 22.33 |
| CDX82768 | Canola | mitochondrion | 19.96 | 22.14 |
| CDX78998 | Canola | mitochondrion | 19.96 | 22.14 |
| CDY49015 | Canola | golgi | 19.96 | 22.09 |
| CDY52524 | Canola | golgi | 19.52 | 20.99 |
| CDY31644 | Canola | golgi | 19.52 | 20.99 |
| CDY71965 | Canola | cytosol, mitochondrion | 10.53 | 20.17 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 18.42 | 19.63 |
| CDY60264 | Canola | plastid | 21.49 | 16.04 |
| CDY49495 | Canola | cytosol | 3.07 | 14.29 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 20.61 | 14.07 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 19.74 | 14.0 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 20.39 | 13.98 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 20.39 | 13.98 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 19.52 | 13.82 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 19.52 | 13.78 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 19.52 | 13.78 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 19.96 | 13.58 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 19.96 | 13.58 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 20.61 | 13.3 |
| CDX81794 | Canola | plastid | 5.48 | 7.2 |
| CDY72469 | Canola | cytosol | 1.97 | 6.82 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.61 | 6.5 |
| CDY71423 | Canola | cytosol, nucleus | 6.14 | 6.5 |
| CDY45471 | Canola | cytosol | 3.51 | 5.39 |
| CDY45969 | Canola | cytosol | 3.51 | 5.39 |
| CDX98052 | Canola | cytosol | 3.73 | 5.26 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078DUG3 | EnsemblPlants:CDX92990 | ProteinID:CDX92990 |
| ProteinID:CDX92990.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016857 | EnsemblPlantsGene:GSBRNA2T00154875001 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF16363 |
| PRINTS:PR01713 | PANTHER:PTHR43574 | PANTHER:PTHR43574:SF19 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0004EE65DC |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g37120D
Coordinates
chrLK031874:+:543653..545640
Molecular Weight (calculated)
50330.0 Da
IEP (calculated)
10.185
GRAVY (calculated)
-0.263
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPSATAADT SKTVKLERYN SYLRKIHSTK VLNASSKVLF RATLLVALVL LLLFAFNYHP LSDSRAAASH HLHRRSFLST GIFSSSSSSS AWEKRVRQSS
101: TAKRQHGLSV LVTGAAGFVG SHCSIALRKR GDGVLGFDNF NDYYDTSLKR ARQNLLEKQQ VFIVEGDLND GPLLRKLFDI VPFTHVLHLA AQAGVRYAMK
201: NPQSYISSNI AGLVNLLEVA KAANPQPAIV WASSSSVYGL NTENPFSEEH RTDQPASLYA ATKKAGEEIA HTYNHIYGLS LTGLRFFTVY GPWGRPDMAY
301: FFFTKAILHG KSIDIYRTQD NQEVARDFTY IDDIVKGCVG ALDTAEKSTG SGGKKRGPAQ LRVYNLGNTS PVPVGRLVSI LEGLLGTKAK KHLIKMPRNG
401: DVPYTHANVS LAYRDFGYKP TTDLATGLRK FVKWYVGYYG IQPRVKKENS HADDSA
101: TAKRQHGLSV LVTGAAGFVG SHCSIALRKR GDGVLGFDNF NDYYDTSLKR ARQNLLEKQQ VFIVEGDLND GPLLRKLFDI VPFTHVLHLA AQAGVRYAMK
201: NPQSYISSNI AGLVNLLEVA KAANPQPAIV WASSSSVYGL NTENPFSEEH RTDQPASLYA ATKKAGEEIA HTYNHIYGLS LTGLRFFTVY GPWGRPDMAY
301: FFFTKAILHG KSIDIYRTQD NQEVARDFTY IDDIVKGCVG ALDTAEKSTG SGGKKRGPAQ LRVYNLGNTS PVPVGRLVSI LEGLLGTKAK KHLIKMPRNG
401: DVPYTHANVS LAYRDFGYKP TTDLATGLRK FVKWYVGYYG IQPRVKKENS HADDSA
001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LNASSKVLFR ATLLVALVLV LIFAINYPPL SDSRAAAAHH LHRRSFLSTG LFSSSSSSSS IGGAAWEKRV
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA
Arabidopsis Description
GAE6UDP-glucuronate 4-epimerase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIS3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.