Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G23920.1 | CDY69000 | AT1G12780.1 | 21798944 |
| AT4G23920.1 | CDX86828 | AT4G10960.1 | 21798944 |
| AT4G23920.1 | CDY40862 | AT4G10960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019257.1-P | Field mustard | plastid | 97.7 | 97.7 |
| AT4G23920.1 | Thale cress | cytosol | 93.39 | 92.86 |
| CDY03506 | Canola | cytosol, golgi | 92.82 | 92.82 |
| CDY47611 | Canola | golgi | 91.95 | 91.95 |
| CDX86828 | Canola | golgi | 86.49 | 86.74 |
| CDY40862 | Canola | cytosol, golgi | 86.21 | 86.46 |
| Solyc12g055930.1.1 | Tomato | cytosol, extracellular, golgi | 78.74 | 78.74 |
| PGSC0003DMT400012829 | Potato | cytosol, extracellular, golgi | 78.74 | 78.74 |
| CDY47846 | Canola | golgi | 77.3 | 78.43 |
| CDY08378 | Canola | golgi | 77.3 | 77.97 |
| GSMUA_Achr5P09200_001 | Banana | golgi | 77.3 | 75.77 |
| GSMUA_Achr9P00170_001 | Banana | extracellular, golgi | 75.86 | 75.64 |
| GSMUA_Achr6P22620_001 | Banana | golgi, mitochondrion | 75.29 | 75.07 |
| GSMUA_Achr4P02670_001 | Banana | golgi | 75.0 | 74.79 |
| EER98731 | Sorghum | plastid | 70.69 | 67.21 |
| Os09t0323000-01 | Rice | cytosol | 70.69 | 66.67 |
| Zm00001d005598_P001 | Maize | plastid | 69.54 | 66.3 |
| TraesCS5A01G183100.1 | Wheat | plastid | 71.26 | 66.13 |
| TraesCS5B01G181300.1 | Wheat | plastid | 71.26 | 66.13 |
| TraesCS5D01G188200.1 | Wheat | plastid | 71.26 | 66.13 |
| HORVU5Hr1G055920.8 | Barley | plastid | 70.98 | 66.04 |
| CDY69000 | Canola | cytosol | 63.22 | 65.67 |
| CDY31278 | Canola | cytosol | 66.09 | 65.53 |
| CDY21065 | Canola | cytosol | 65.8 | 65.24 |
| CDY47346 | Canola | cytosol | 65.23 | 64.67 |
| CDY49193 | Canola | cytosol | 65.23 | 64.67 |
| Zm00001d020093_P002 | Maize | golgi | 56.03 | 64.57 |
| GSMUA_Achr8P27530_001 | Banana | cytosol, golgi, plastid | 77.01 | 63.21 |
| Os08t0374800-01 | Rice | golgi | 71.26 | 60.78 |
| GSMUA_Achr3P16370_001 | Banana | golgi, mitochondrion, plastid | 74.43 | 59.82 |
| Zm00001d032346_P002 | Maize | endoplasmic reticulum, golgi, plastid | 72.41 | 59.57 |
| EES14924 | Sorghum | endoplasmic reticulum, golgi, plastid | 72.41 | 59.57 |
| CDY49495 | Canola | cytosol | 15.23 | 54.08 |
| GSMUA_Achr9P06140_001 | Banana | plastid | 75.86 | 50.67 |
| GSMUA_Achr6P26620_001 | Banana | plastid | 75.0 | 48.6 |
| CDY71965 | Canola | cytosol, mitochondrion | 27.01 | 39.5 |
| CDY60264 | Canola | plastid | 66.09 | 37.64 |
| CDY09555 | Canola | mitochondrion | 42.24 | 35.0 |
| CDY49498 | Canola | golgi | 41.38 | 34.95 |
| CDX78998 | Canola | mitochondrion | 41.09 | 34.79 |
| CDY02312 | Canola | mitochondrion | 41.95 | 34.76 |
| CDY13102 | Canola | golgi | 41.09 | 34.71 |
| CDY29113 | Canola | golgi | 41.09 | 34.71 |
| CDY49015 | Canola | golgi | 41.09 | 34.71 |
| CDX82768 | Canola | mitochondrion | 40.8 | 34.55 |
| CDY31644 | Canola | golgi | 41.95 | 34.43 |
| CDY52524 | Canola | golgi | 41.67 | 34.2 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 25.29 | 20.51 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.0 | 20.23 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 25.29 | 20.23 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 24.71 | 20.05 |
| CDY53207 | Canola | endoplasmic reticulum | 26.15 | 20.0 |
| CDX92990 | Canola | endoplasmic reticulum | 26.15 | 19.96 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 24.71 | 19.82 |
| CDX77481 | Canola | endoplasmic reticulum | 25.57 | 19.65 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 24.14 | 19.53 |
| CDX85133 | Canola | endoplasmic reticulum | 25.57 | 19.52 |
| CDY64583 | Canola | endoplasmic reticulum | 25.57 | 19.35 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 25.57 | 19.35 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 23.85 | 19.35 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 23.85 | 19.35 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 24.14 | 19.31 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 24.14 | 19.31 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 23.85 | 19.3 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 22.7 | 18.46 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 25.57 | 13.28 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 25.57 | 13.28 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 24.43 | 12.78 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 24.43 | 12.78 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 25.86 | 12.73 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 24.43 | 12.72 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 23.28 | 12.6 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 23.28 | 12.58 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 23.28 | 12.54 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 23.28 | 12.54 |
| CDX81794 | Canola | plastid | 6.9 | 6.92 |
| CDY71423 | Canola | cytosol, nucleus | 6.9 | 5.57 |
| CDY45969 | Canola | cytosol | 4.02 | 4.71 |
| CDY45471 | Canola | cytosol | 4.02 | 4.71 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.31 | 4.64 |
| CDY72469 | Canola | cytosol | 1.72 | 4.55 |
| CDX98052 | Canola | cytosol | 3.74 | 4.02 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | MapMan:3.13.8 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078IKA6 |
| UniProt:A0A078IKA6 | EnsemblPlants:CDY50431 | ProteinID:CDY50431 | ProteinID:CDY50431.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003978 | GO:GO:0005975 | GO:GO:0006012 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016853 |
| GO:GO:0016857 | EnsemblPlantsGene:GSBRNA2T00096686001 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF16363 |
| PRINTS:PR01713 | PANTHER:PTHR43725 | PANTHER:PTHR43725:SF11 | MetaCyc:PWY-3821 | MetaCyc:PWY-6317 | MetaCyc:PWY-6397 |
| MetaCyc:PWY-6527 | MetaCyc:PWY-7328 | MetaCyc:PWY-7344 | SUPFAM:SSF51735 | TIGRFAMs:TIGR01179 | InterPro:UDP_G4E |
| UniPathway:UPA00214 | UniParc:UPI0004EDC9FC | SEG:seg | : | : | : |
Description
BnaC07g38610DBnaC07g38610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKA6]
Coordinates
chrLK032910:+:5003..7384
Molecular Weight (calculated)
38334.5 Da
IEP (calculated)
5.646
GRAVY (calculated)
-0.250
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKNILVTGG SGYIGSHTVL QLLNGGYSAV VVDNLDNSSA VSLERVKKIA GQNEDRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNVVGTI TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DPEWKIILLR YFNPVGAHPS GYIGEDPLGI
201: PNNLMPYIQQ VAVGRRPHLT VFGTDYKTND GTGVRDYIHV IDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEIVYASTEE AERELNWKAK YGIEEMCTDL WNWASNNPYG YNSSNGSS
101: YYNNNVVGTI TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DPEWKIILLR YFNPVGAHPS GYIGEDPLGI
201: PNNLMPYIQQ VAVGRRPHLT VFGTDYKTND GTGVRDYIHV IDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEIVYASTEE AERELNWKAK YGIEEMCTDL WNWASNNPYG YNSSNGSS
001: MAKSVLVTGG AGYIGSHTVL QLLEGGYSAV VVDNYDNSSA ASLQRVKKLA GENGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS
Arabidopsis Description
UGE2UDP-glucose 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.