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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038127.1-P Field mustard cytosol, mitochondrion, peroxisome 99.3 63.62
CDY60210 Canola cytosol, mitochondrion, peroxisome 99.3 63.62
CDY45116 Canola cytosol, mitochondrion, peroxisome 96.26 61.95
CDY24092 Canola cytosol, mitochondrion, peroxisome 95.56 61.5
AT1G53500.1 Thale cress cytosol, extracellular, peroxisome 94.16 60.42
CDX98494 Canola cytosol, mitochondrion, plastid 85.75 56.81
CDX97601 Canola cytosol, mitochondrion, plastid 85.75 56.81
CDY20084 Canola cytosol, mitochondrion, peroxisome 84.81 56.37
CDY32340 Canola cytosol, mitochondrion, peroxisome 84.11 55.99
GSMUA_Achr4P10430_001 Banana cytosol, extracellular, mitochondrion 82.01 54.08
CDY35137 Canola cytosol, mitochondrion, plastid 84.58 54.03
CDY40003 Canola cytosol, mitochondrion, plastid 84.35 53.88
Zm00001d047796_P003 Maize extracellular, nucleus, plasma membrane 82.48 52.53
TraesCS4A01G099200.1 Wheat cytosol 82.71 52.44
CDX88455 Canola cytosol, peroxisome, plastid 86.45 52.33
Os03t0278200-01 Rice nucleus, plasma membrane 82.24 52.15
EER95086 Sorghum cytosol, mitochondrion, plastid 81.54 51.93
TraesCS4B01G205100.3 Wheat mitochondrion 82.71 51.91
TraesCS4D01G206000.1 Wheat mitochondrion 82.71 51.91
EER95078 Sorghum cytosol, mitochondrion, peroxisome 81.07 51.64
Zm00001d028654_P002 Maize cytosol 80.37 51.19
GSMUA_Achr3P31810_001 Banana cytosol, mitochondrion, peroxisome 72.66 50.08
GSMUA_Achr3P31820_001 Banana cytosol, mitochondrion, plastid 70.09 49.59
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 73.13 49.21
HORVU4Hr1G059120.2 Barley plastid 82.48 48.82
VIT_04s0069g00830.t01 Wine grape cytosol, mitochondrion, plastid 71.5 46.58
Solyc08g069110.2.1 Tomato unclear 70.33 46.24
PGSC0003DMT400075973 Potato cytosol, mitochondrion, peroxisome 70.33 46.02
KRH16155 Soybean cytosol 69.63 45.5
KRH04933 Soybean cytosol, mitochondrion, plastid 67.29 44.72
CDY71423 Canola cytosol, nucleus 35.51 35.27
CDX81794 Canola plastid 25.93 31.99
CDY47846 Canola golgi 18.93 23.62
CDY08378 Canola golgi 18.69 23.19
CDY31278 Canola cytosol 18.69 22.79
CDY21065 Canola cytosol 18.69 22.79
CDY50431 Canola cytosol 18.46 22.7
CDY47611 Canola golgi 18.46 22.7
CDY03506 Canola cytosol, golgi 18.46 22.7
CDY49193 Canola cytosol 17.99 21.94
CDY47346 Canola cytosol 17.99 21.94
CDY40862 Canola cytosol, golgi 17.76 21.9
CDX86828 Canola golgi 17.76 21.9
CDY69000 Canola cytosol 17.06 21.79
CDY71965 Canola cytosol, mitochondrion 11.92 21.43
CDX86716 Canola cytosol, endoplasmic reticulum, peroxisome 20.09 19.82
CDY04398 Canola cytosol, endoplasmic reticulum, golgi 19.86 19.81
CDX94504 Canola cytosol, endoplasmic reticulum, peroxisome 20.09 19.77
CDY63064 Canola cytosol, endoplasmic reticulum, golgi, plastid 19.86 19.77
CDX78998 Canola mitochondrion 18.93 19.71
CDX82768 Canola mitochondrion 18.93 19.71
CDX97356 Canola cytosol, endoplasmic reticulum, golgi 19.63 19.58
CDY67756 Canola cytosol, endoplasmic reticulum, golgi, plastid 19.63 19.31
CDX95646 Canola cytosol, endoplasmic reticulum, golgi, plastid 19.39 19.08
CDY09555 Canola mitochondrion 18.69 19.05
CDY02312 Canola mitochondrion 18.69 19.05
CDY49498 Canola golgi 18.22 18.93
CDY13102 Canola golgi 18.22 18.93
CDY49015 Canola golgi 18.22 18.93
CDY29113 Canola golgi 18.22 18.93
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 18.93 18.84
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 18.93 18.84
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 18.69 18.65
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 18.69 18.65
CDY52524 Canola golgi 18.46 18.63
CDY31644 Canola golgi 18.46 18.63
CDX92990 Canola endoplasmic reticulum 19.63 18.42
CDX77481 Canola endoplasmic reticulum 19.39 18.32
CDY53207 Canola endoplasmic reticulum 19.39 18.24
CDX85133 Canola endoplasmic reticulum 19.39 18.2
CDY64583 Canola endoplasmic reticulum 19.16 17.83
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 19.16 17.83
CDX98052 Canola cytosol 10.51 13.93
CDY60264 Canola plastid 18.69 13.09
CDY57072 Canola cytosol, extracellular, peroxisome 9.58 12.69
CDY45471 Canola cytosol 8.64 12.46
CDY45969 Canola cytosol 8.64 12.46
CDY49495 Canola cytosol 2.57 11.22
CDY72469 Canola cytosol 0.7 2.27
Protein Annotations
KEGG:00521+4.2.1.46KEGG:00523+4.2.1.46KEGG:00525+4.2.1.46Gene3D:3.40.50.720Gene3D:3.90.25.10MapMan:35.1
GO:A0A078GHA5UniProt:A0A078GHA5EnsemblPlants:CDY25850ProteinID:CDY25850ProteinID:CDY25850.1GO:GO:0003674
GO:GO:0003824GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0008460GO:GO:0009225
GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00033282001InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPFAM:PF16363PANTHER:PTHR43000
PANTHER:PTHR43000:SF8MetaCyc:PWY-3221MetaCyc:PWY-6808MetaCyc:PWY-6942MetaCyc:PWY-6953MetaCyc:PWY-6973
MetaCyc:PWY-6974MetaCyc:PWY-6976MetaCyc:PWY-7104MetaCyc:PWY-7301MetaCyc:PWY-7312MetaCyc:PWY-7315
MetaCyc:PWY-7316MetaCyc:PWY-7318MetaCyc:PWY-7413MetaCyc:PWY-7414MetaCyc:PWY-7440MetaCyc:PWY-7657
MetaCyc:PWY-7688SUPFAM:SSF51735TIGRFAMs:TIGR01181UniParc:UPI0004EEDFE9InterPro:dTDP_Gluc_deHydtase:
Description
BnaA05g14410DBnaA05g14410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHA5]
Coordinates
chrLK032181:+:200176..201810
Molecular Weight (calculated)
47822.9 Da
IEP (calculated)
6.907
GRAVY (calculated)
-0.397
Length
428 amino acids
Sequence
(BLAST)
001: MATTYKPKNI LITGAAGFIA SHVANRLIRS YPDYKIVVLD KLDYCSDLKN LNPSHSSPNF KFVKGDIASD DLVSYLLITE NIDTIMHFAA QTHVDNSFGN
101: SFEFTKNNIY GTHVLLEACK VTGQIRRFIH VSTDEVYGET DEDAAVGNHE ASQLLPTNPY SATKAGAEML VMAYGRSYGL PVITTRGNNV YGPNQFPEKM
201: IPKFMLLAMS GKPLPIHGDG SNVRSYLYCE DVAEAFEVVL HKGEVGHVYN IGTKRERRVI DVARDICKLL GKDPESSIQF VENRPFNDQR YFLDDQKLKN
301: LGWSERTGWE DGLKKTMEWY TQNPEWWGDV SGALLPHPRM LMMPGGRLSD VSDEKKDASS NTVQTFTVVT PNNKTAGSND KASLKFLIYG KTGWIGGLLG
401: KLCEKQGITY EYGKGRLEDR ASLTLKDL
Best Arabidopsis Sequence Match ( AT1G53500.1 )
(BLAST)
001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT
Arabidopsis Description
RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [peroxisome,extracellular,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.