Factsheet for Zm00001d010657_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, vacuole

Predictor Summary:

plastid 2
vacuole 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017999_P002	Maize	mitochondrion	58.38	64.95
CDY71965	Canola	cytosol, mitochondrion	27.75	40.34
AT2G34850.2	Thale cress	cytosol	26.88	39.41
Solyc07g043550.2.1	Tomato	cytosol, unclear	32.95	37.75
PGSC0003DMT400041159	Potato	golgi, mitochondrion	36.99	32.99
VIT_03s0017g00980.t01	Wine grape	golgi	39.6	32.85
PGSC0003DMT400080637	Potato	golgi	37.28	32.25
Solyc12g006410.1.1	Tomato	unclear	36.99	32.08
CDY29113	Canola	golgi	37.86	31.8
CDY13102	Canola	golgi	37.86	31.8
Zm00001d047683_P003	Maize	mitochondrion	38.73	31.6
Bra027557.1-P	Field mustard	golgi	37.57	31.55
Bra033746.1-P	Field mustard	golgi	37.57	31.55
CDY49015	Canola	golgi	37.57	31.55
AT4G20460.1	Thale cress	golgi, mitochondrion	37.28	31.39
CDX78998	Canola	mitochondrion	37.28	31.39
CDX82768	Canola	mitochondrion	37.28	31.39
CDY49498	Canola	golgi	37.28	31.31
Zm00001d028825_P001	Maize	golgi, mitochondrion	38.15	31.28
Bra032409.1-P	Field mustard	mitochondrion	37.86	31.26
AT1G30620.4	Thale cress	golgi, mitochondrion	37.86	31.26
CDY02312	Canola	mitochondrion	37.86	31.19
CDY09555	Canola	mitochondrion	37.86	31.19
Bra020917.1-P	Field mustard	golgi, mitochondrion	36.99	31.14
CDY31644	Canola	golgi	38.15	31.13
KRH36892	Soybean	golgi, mitochondrion	37.28	31.08
KRH11871	Soybean	golgi, plastid	37.28	31.08
Solyc02g030230.2.1	Tomato	mitochondrion	37.28	31.01
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	37.28	30.94
CDY52524	Canola	golgi	37.86	30.9
KRH43065	Soybean	golgi, mitochondrion, plastid	36.99	30.77
KRH59194	Soybean	golgi, mitochondrion	36.71	30.53
PGSC0003DMT400054459	Potato	mitochondrion	36.71	30.46
AT5G44480.1	Thale cress	mitochondrion	37.57	29.82
Bra005387.1-P	Field mustard	golgi, mitochondrion	38.15	29.07
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	36.71	27.91
Bra013466.1-P	Field mustard	mitochondrion	36.42	27.21
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	39.6	27.13
Zm00001d020093_P002	Maize	golgi	15.9	18.21
Zm00001d005598_P001	Maize	plastid	17.92	16.99
Zm00001d029151_P002	Maize	extracellular, golgi	17.05	16.62
Zm00001d021249_P003	Maize	cytosol	15.9	15.15
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	18.5	15.13
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	11.56	8.89
Zm00001d018350_P001	Maize	plasma membrane	11.27	8.88
Zm00001d045078_P001	Maize	extracellular, golgi	10.4	8.72
Zm00001d049804_P001	Maize	plasma membrane	10.69	8.26
Zm00001d021026_P001	Maize	endoplasmic reticulum	11.56	8.21
Zm00001d037087_P001	Maize	endoplasmic reticulum	10.4	8.18
Zm00001d028427_P001	Maize	plastid	10.69	7.72
Zm00001d047915_P001	Maize	plastid	10.69	7.72
Zm00001d034293_P001	Maize	plastid	4.05	6.33
Zm00001d028654_P002	Maize	cytosol	12.14	6.25
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	12.14	6.25
Zm00001d037784_P002	Maize	endoplasmic reticulum	12.43	6.18
Zm00001d037310_P001	Maize	plastid	4.91	5.59
Zm00001d038116_P001	Maize	plastid	4.34	4.63
Zm00001d017794_P001	Maize	plastid	4.91	4.56
Zm00001d014509_P001	Maize	cytosol	3.47	4.18
Zm00001d017601_P001	Maize	extracellular, peroxisome	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.25.10	MapMan:35.1	UniProt:A0A1D6FSL9	ProteinID:AQK94556.1	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR43349	PANTHER:PTHR43349:SF18	SUPFAM:SSF51735
TMHMM:TMhelix	UniParc:UPI0008438C92	EnsemblPlantsGene:Zm00001d010657	EnsemblPlants:Zm00001d010657_P001	EnsemblPlants:Zm00001d010657_T001	SEG:seg

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr8:+:123110987..123114748

Molecular Weight (calculated)

38063.0 Da

IEP (calculated)

9.507

GRAVY (calculated)

-0.007

Length

346 amino acids

Sequence
(BLAST)

001: MMARRKRKDG GGGWWAKVVI NFPHSVNLCS GGFTSHAALF ASYNVHLLTA LVLQRGSLSL SAVIGEMQSG SKNILVISDS SGSKMGKERA FCAEGDLAAL
101: VRSGFTNAST GRTVSYNEGT WCSTDHSSTY SPDCILWIPG YKNITAYFGC YTLAHAASER GAKQTSLFRA RTLKEYQPEI LLFIFVGYAG GFFLEHSFFV
201: DDVINVRYYR NITANTLAVL EAMAAHNVRT LIYSSTCATY GEPDKMPIAE GTPMFPINPY GKAKKMAEDV ILDFSKSKKL DMMAVMILRY FNVIGSDLKG
301: RLGEAPRHEL RKHGCISGAC FDATLGIIPG LKSLRVAWVW QKAHRL

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.