Factsheet for TraesCS5A01G314800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G314800.1
TraesCS5B01G315700.1
TraesCS5D01G321100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12780.1	TraesCS5A01G314800.1	AT1G12780.1	21798944
AT1G12780.1	TraesCS5B01G315700.1	AT1G12780.1	21798944
AT1G12780.1	TraesCS5D01G321100.1	AT1G12780.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G321100.1	Wheat	cytosol	98.64	98.37
TraesCS5B01G315700.1	Wheat	cytosol	98.37	98.37
HORVU5Hr1G080860.10	Barley	mitochondrion	98.1	85.14
KXG36042	Sorghum	cytosol	78.8	79.67
Zm00001d021249_P003	Maize	cytosol	78.53	79.61
KRH00406	Soybean	cytosol, mitochondrion, nucleus	14.4	76.81
Os09t0526700-01	Rice	cytosol	76.9	75.87
KRG99450	Soybean	cytosol, mitochondrion, nucleus	14.13	75.36
KRH59827	Soybean	extracellular, golgi	68.48	72.0
KRH41129	Soybean	nucleus	68.48	72.0
CDY31278	Canola	cytosol	68.21	71.51
Bra016757.1-P	Field mustard	cytosol	68.21	71.51
GSMUA_Achr1P18740_001	Banana	cytosol	68.75	71.47
CDY21065	Canola	cytosol	67.93	71.23
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	67.93	71.23
CDY49193	Canola	cytosol	66.85	70.09
CDY47346	Canola	cytosol	66.85	70.09
GSMUA_Achr5P13620_001	Banana	cytosol	66.58	69.8
Bra027626.1-P	Field mustard	cytosol	66.3	69.52
CDY69000	Canola	cytosol	63.04	69.25
Bra019785.1-P	Field mustard	cytosol	63.04	69.25
Solyc08g080570.2.1	Tomato	cytosol	66.03	69.23
AT1G63180.1	Thale cress	cytosol	66.03	69.23
VIT_02s0025g04210.t01	Wine grape	cytosol	65.76	69.14
PGSC0003DMT400007898	Potato	cytosol	65.76	68.95
KRH51264	Soybean	plastid	64.95	68.09
Bra039253.1-P	Field mustard	cytosol	63.86	67.72
TraesCS1A01G443900.1	Wheat	endoplasmic reticulum, golgi	61.14	63.56
TraesCS5A01G183100.1	Wheat	plastid	58.97	57.87
CDY60264	Canola	plastid	67.39	40.59
TraesCS7A01G311100.1	Wheat	golgi	36.96	33.58
TraesCS2A01G460400.1	Wheat	unclear	37.5	33.5
TraesCS5A01G291300.1	Wheat	golgi	38.32	33.49
TraesCS7A01G152300.1	Wheat	endoplasmic reticulum	26.63	22.12
TraesCS6A01G353200.1	Wheat	plastid	24.46	20.55
TraesCS4A01G080300.1	Wheat	plastid	25.27	19.46
TraesCS1A01G315300.1	Wheat	cytosol, mitochondrion, plastid	18.75	18.75
TraesCS5A01G281600.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	23.37	17.84
TraesCS7A01G256600.1	Wheat	plastid	23.64	17.76
TraesCS4A01G099200.1	Wheat	cytosol	22.83	12.44
TraesCS6A01G257500.1	Wheat	peroxisome	2.45	3.0

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152
GO:GO:0016857	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF16363	PRINTS:PR01713
PANTHER:PTHR43725	PANTHER:PTHR43725:SF9	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	EnsemblPlantsGene:TraesCS5A01G314800	EnsemblPlants:TraesCS5A01G314800.1
InterPro:UDP_G4E	TIGR:cd05247	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:-:525116056..525117885

Molecular Weight (calculated)

40428.1 Da

IEP (calculated)

6.848

GRAVY (calculated)

-0.330

Length

368 amino acids

Sequence
(BLAST)

001: MAIGGVGAGG GAGSGEGQGR SVLVTGGAGF IGTHTVLQLL EKGYAVTAVD NFHNSVPEAL DRVRHIVGPA LSARLQFIFG DLTIKDDLEK VFAAKRYDAV
101: IHFAGLKAVA ESVAHPEMYN RNNIVGTVNL YDVMKKHGCN KLVFSSSATV YGQPEKVPCF EDSPLKALNP YGRTKLYLEE MLRDYQHANP EWRTILLRYF
201: NPIGAHESGD IGEDPKGVPN NLLPYIQQVA VGRRPELNVY GYDYRTRDGT AVRDYIHVVD LADGHIAALE KLFATPDIGC VAYNLGTGRG TTVLEMVSAF
301: EKAYGKKIPV KMCPRRPGDS EQVYASTAKA EEELGWRAKY GIEEMCRDQW NWAKKNPYGY CGDAENKD

Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L

Arabidopsis Description

UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.