Factsheet for GSMUA_Achr4P29060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	golgi, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P03840_001	Banana	cytosol	61.64	44.12
GSMUA_Achr5P10430_001	Banana	cytosol	59.36	42.48
KRH57441	Soybean	cytosol	43.38	30.55
CDY71423	Canola	cytosol, nucleus	54.79	27.84
GSMUA_Achr4P02550_001	Banana	mitochondrion	56.62	27.19
GSMUA_Achr3P31810_001	Banana	cytosol, mitochondrion, peroxisome	58.45	20.61
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	59.36	20.44
GSMUA_Achr4P10430_001	Banana	cytosol, extracellular, mitochondrion	59.82	20.18
GSMUA_Achr3P31820_001	Banana	cytosol, mitochondrion, plastid	53.88	19.5
GSMUA_Achr5P25290_001	Banana	mitochondrion	1.83	3.45
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	5.94	3.22
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	5.94	3.13
GSMUA_Achr4P29070_001	Banana	cytosol	0.91	3.03
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	5.48	2.96
GSMUA_Achr8P08790_001	Banana	endoplasmic reticulum, nucleus, peroxisome	5.94	2.93
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	5.48	2.9
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	5.48	2.79
GSMUA_Achr8P00950_001	Banana	cytosol, endoplasmic reticulum, golgi	5.48	2.71
GSMUA_Achr5P13620_001	Banana	cytosol	4.11	2.56
GSMUA_Achr1P18740_001	Banana	cytosol	4.11	2.54
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	5.02	2.48
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	5.48	2.35
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	4.11	2.34
GSMUA_Achr11P...	Banana	cytosol, golgi	4.11	2.3
GSMUA_Achr4P02670_001	Banana	golgi	3.65	2.29
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	4.57	2.18
GSMUA_Achr4P31860_001	Banana	mitochondrion	4.11	2.16
GSMUA_Achr11P...	Banana	mitochondrion	4.11	2.16
GSMUA_Achr3P23390_001	Banana	mitochondrion	4.11	2.16
GSMUA_Achr8P33320_001	Banana	mitochondrion	4.11	2.16
GSMUA_Achr7P02740_001	Banana	endoplasmic reticulum	4.57	2.06
GSMUA_Achr5P04690_001	Banana	endoplasmic reticulum, golgi, nucleus	4.11	1.95
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	2.74	1.72
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	2.74	1.72
GSMUA_Achr5P09200_001	Banana	golgi	2.74	1.69
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	3.2	1.65
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	3.2	1.62
GSMUA_Achr9P06140_001	Banana	plastid	3.2	1.34
GSMUA_Achr6P26620_001	Banana	plastid	3.2	1.3

Protein Annotations

EnsemblPlants:GSMUA_Achr4P29060_001	EnsemblPlants:GSMUA_Achr4T29060_001	EnsemblPlantsGene:GSMUA_Achr4G29060_001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:RmlD-like-bd
PANTHER:PTHR10366	PANTHER:PTHR10366:SF405	PFAM:PF04321	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002962A05
UniProt:M0ST18	MapMan:3.13.6.1	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G29060_001]

Coordinates

chr4:+:27198620..27200940

Molecular Weight (calculated)

23686.5 Da

IEP (calculated)

6.232

GRAVY (calculated)

0.089

Length

219 amino acids

Sequence
(BLAST)

001: MSTPLFRFLL STFRFVPSSD PDFHEWAVID GLGLRSNGRN PAGLKFLIGG PLGRLCEDHG IPFAFGSGRL ENRAQLEADI AAAALTHVIN AAGVTGRPIV
101: DWCEDHRVDV ETIRANVVGT LTLGDVCRER GLLLVNCATG CIFEYDGAHT LGSGAGFKEE DTPNLVGSFC SKTKAMVEEL LKNVCTLHVW MPVSSDLSTL
201: AISLPKSPAM RRLLTYQTP

Best Arabidopsis Sequence Match ( AT1G53500.1 )
(BLAST)

001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT

Arabidopsis Description

RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.