CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 1
endoplasmic reticulum 2
golgi 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037087_P001	Maize	endoplasmic reticulum	97.5	97.5
TraesCS7D01G154100.1	Wheat	golgi	92.73	94.23
TraesCS7A01G152300.1	Wheat	endoplasmic reticulum	94.55	93.91
TraesCS7B01G056200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	94.09	93.45
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	93.86	93.23
Zm00001d045078_P001	Maize	extracellular, golgi	87.5	93.22
Os06t0187200-01	Rice	golgi, peroxisome	63.18	89.97
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	88.86	89.07
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	75.0	81.48
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	74.09	80.69
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	75.91	80.48
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	75.68	80.43
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	77.27	78.89
KRH02967	Soybean	nucleus	77.05	78.65
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	76.14	78.09
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	75.91	77.86
CDY28188	Canola	cytosol, endoplasmic reticulum, golgi, plastid	75.91	77.86
CDY70926	Canola	cytosol, endoplasmic reticulum, golgi, plastid	75.91	77.86
CDX72242	Canola	cytosol, endoplasmic reticulum, golgi, plastid	75.68	77.44
CDY39205	Canola	cytosol, endoplasmic reticulum, golgi, plastid	75.45	77.21
Solyc07g006220.1.1	Tomato	nucleus	74.32	76.94
PGSC0003DMT400029181	Potato	cytosol, golgi, peroxisome	74.32	76.94
PGSC0003DMT400020223	Potato	endoplasmic reticulum	75.23	76.8
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	74.77	76.51
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	74.09	75.46
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	57.27	65.45
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	74.32	63.99
EER95171	Sorghum	plastid	60.91	55.83
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	60.45	55.53
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	60.0	53.44
KXG36042	Sorghum	cytosol	21.82	26.37
EER94859	Sorghum	extracellular, golgi	20.45	25.35
EER98731	Sorghum	plastid	20.45	24.59
EER95001	Sorghum	mitochondrion	20.45	22.11
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	20.23	21.04
KXG27129	Sorghum	mitochondrion, plastid	19.77	20.96
EER95854	Sorghum	mitochondrion, plastid	19.55	20.0
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	20.91	13.69
EER95086	Sorghum	cytosol, mitochondrion, plastid	20.68	13.54
KXG21627	Sorghum	mitochondrion	20.23	12.97
EES07456	Sorghum	cytosol, peroxisome, plastid	2.95	4.23

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:8077283	UniProt:A0A1W0VRT7	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf
InterPro:Nuc_sugar_epim	EnsemblPlants:OQU75981	ProteinID:OQU75981	ProteinID:OQU75981.1	PFAM:PF01370	PRINTS:PR01713
PANTHER:PTHR43574	PANTHER:PTHR43574:SF17	EnsemblPlantsGene:SORBI_3010G068001	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0001A8977D
RefSeq:XP_002437985.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:5457949..5459271

Molecular Weight (calculated)

48474.9 Da

IEP (calculated)

9.968

GRAVY (calculated)

-0.184

Length

440 amino acids

Sequence
(BLAST)

001: MRVLEEDLYP STPGKVKVER PGAMSRHLHR CFASTGTMFL WALFLVAMTA TYLSVHSFVD TSSRYFAASW GGLHWERQIR ASASPRRPPG SAEGAGLSVL
101: VTGAAGFVGT HCSLALRKRG DGVVGIDNFN NYYDPSLKKA RRALLGSHGV FVVEGDINDG RLLAKLFDVV PFTHVLHLAA QAGVRYAMEN PASYVHSNIA
201: GLVSLLEACK DADPQPAVVW ASSSSVYGLN DRVPFSEAHR TDRPASLYAA TKKAGEEITH TYNHIYGLSV TGLRFFTVYG PWGRPDMAYF SFTRNILQGK
301: PITVYRGRDH VALARDFTYI DDIVRGCLAS LDTAGRSTGT GGKKRGPAQY RIFNLGNTSP VTVPTLVAIL ERYLRVKAKK NVVEMPGNGD VPYTHANISL
401: AREELGYKPT TSLEMGLKKF VRWYLSYYGY NRGTHTFRNS

Best Arabidopsis Sequence Match ( AT4G30440.1 )
(BLAST)

001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH

Arabidopsis Description

GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.