Factsheet for TraesCS7B01G056200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, peroxisome

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, peroxisome
Any Predictor:	endoplasmic reticulum, golgi, peroxisome
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G154100.1	Wheat	golgi	97.52	99.77
TraesCS7A01G152300.1	Wheat	endoplasmic reticulum	99.55	99.55
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	99.32	99.32
Zm00001d037087_P001	Maize	endoplasmic reticulum	93.68	94.32
OQU75981	Sorghum	endoplasmic reticulum	93.45	94.09
Zm00001d045078_P001	Maize	extracellular, golgi	84.88	91.04
Os06t0187200-01	Rice	golgi, peroxisome	62.53	89.64
TraesCS6B01G385900.1	Wheat	plastid	86.68	87.67
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	73.81	80.74
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	75.62	80.72
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	73.36	80.45
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	75.17	80.43
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	77.43	79.58
KRH02967	Soybean	nucleus	76.98	79.12
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	75.39	77.86
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	75.17	77.62
CDY28188	Canola	cytosol, endoplasmic reticulum, golgi, plastid	75.17	77.62
CDY70926	Canola	cytosol, endoplasmic reticulum, golgi, plastid	75.17	77.62
CDX72242	Canola	cytosol, endoplasmic reticulum, golgi, plastid	75.17	77.44
CDY39205	Canola	cytosol, endoplasmic reticulum, golgi, plastid	74.94	77.21
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	74.27	76.51
PGSC0003DMT400020223	Potato	endoplasmic reticulum	73.59	75.64
PGSC0003DMT400029181	Potato	cytosol, golgi, peroxisome	72.46	75.53
Solyc07g006220.1.1	Tomato	nucleus	72.46	75.53
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	72.69	74.54
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	57.11	65.71
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	73.36	63.6
TraesCS4B01G223700.1	Wheat	plastid	60.27	54.38
TraesCS5B01G280700.1	Wheat	endoplasmic reticulum	58.47	54.18
TraesCS7B01G153900.1	Wheat	plastid	58.69	52.85
TraesCS5B01G315700.1	Wheat	cytosol	22.35	26.9
TraesCS1B01G478400.1	Wheat	endoplasmic reticulum, golgi	18.96	23.73
TraesCS5B01G181300.1	Wheat	plastid	19.64	23.2
TraesCS7B01G210700.2	Wheat	golgi	20.77	22.28
TraesCS2B01G482000.1	Wheat	golgi	19.86	21.36
TraesCS1B01G327200.1	Wheat	peroxisome	17.38	20.92
TraesCS5B01G290300.1	Wheat	mitochondrion	18.96	19.95
TraesCS5B01G023700.1	Wheat	cytosol, mitochondrion, plastid	20.54	13.64
TraesCS4B01G205100.3	Wheat	mitochondrion	19.86	12.9
TraesCS6B01G267600.1	Wheat	peroxisome	2.93	4.33

Protein Annotations

EnsemblPlants:TraesCS7B01G056200.1	EnsemblPlantsGene:TraesCS7B01G056200	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016857	GO:GO:0050662
InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PANTHER:PTHR43574	PANTHER:PTHR43574:SF17	PFAM:PF01370
PRINTS:PR01713	SEG:seg	SUPFAM:SSF51735	TMHMM:TMhelix	MapMan:3.13.4.1	:

Description

No Description!

Coordinates

chr7B:-:59099577..59100908

Molecular Weight (calculated)

48770.3 Da

IEP (calculated)

9.781

GRAVY (calculated)

-0.146

Length

443 amino acids

Sequence
(BLAST)

001: MRVLAEEEED MLPSTPGKVK IERAGAMTRQ LHRCFASTGT MFLWALFLVA MTATYLSFHS FVDTSSRYFA ASWGGLHWER QIRASASPRR PPGSAEGAGL
101: SVLVTGAAGF VGTHCSLALR KRGDGVVGID NFNKYYDPSL KKARRALLAS HGVFVVEGDI TDGRLLTKLF DVVPFTHVLH LAAQAGVRYA MENPASYVHS
201: NIAGLVSLLE ACKEADPQPA VVWASSSSVY GLNDAVPFSE AHRTDRPASL YAATKKAGEE ITHTYNHIYG LSVTGLRFFT VYGPWGRPDM AYFSFTRNIL
301: QGKPITVYRG RDHVDLARDF TYIDDIVRGC LASLDTAGRS TGTGGRKRGP APYRIFNLGN TAPVTVPTLV SILERYLRVN AKRNVVEMPG NGDVPFTHAN
401: ISLAREQLGY KPTTSLEMGL KKFVRWYLSY YGYNRGTQAF NNL

Best Arabidopsis Sequence Match ( AT4G30440.1 )
(BLAST)

001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH

Arabidopsis Description

GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.