Factsheet for Os05t0203400-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G315500.1	Wheat	cytosol, mitochondrion, plastid	28.14	25.54
TraesCS1B01G327200.1	Wheat	peroxisome	28.14	25.54
TraesCS1A01G315300.1	Wheat	cytosol, mitochondrion, plastid	27.54	25.0
Os03t0278200-01	Rice	nucleus, plasma membrane	36.53	18.07
Os07t0139400-01	Rice	plasma membrane	13.77	10.93
Os08t0129700-01	Rice	mitochondrion	13.17	10.84
Os04t0618200-02	Rice	golgi	12.57	10.74
Os05t0595100-01	Rice	plastid	11.38	10.73
Os09t0323000-01	Rice	cytosol	11.38	10.3
Os08t0374800-01	Rice	golgi	12.57	10.29
Os02t0678400-01	Rice	plasma membrane	9.58	10.29
Os09t0526700-01	Rice	cytosol	11.38	10.19
Os03t0249500-01	Rice	plastid	13.77	9.5
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	11.68	8.92
Os06t0187200-01	Rice	golgi, peroxisome	8.08	8.74
Os08t0526100-01	Rice	plastid	12.28	8.58
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	12.57	8.43
Os03t0249400-01	Rice	nucleus, plasma membrane	0.3	0.79

Protein Annotations

EnsemblPlants:Os05t0203400-00	EnsemblPlantsGene:Os05g0203400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43000
PANTHER:PTHR43000:SF8	PFAM:PF16363	ProteinID:BAS92732.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000393A734
UniProt:A0A0P0WJ20	MapMan:35.1	:	:	:	:

Description

Hypothetical conserved gene. (Os05t0203400-00)

Coordinates

chr5:-:6415879..6417129

Molecular Weight (calculated)

35906.9 Da

IEP (calculated)

12.181

GRAVY (calculated)

-0.480

Length

334 amino acids

Sequence
(BLAST)

001: MAPAAAASVS AAADAAAASY TTPRNILITG AAGFIASHVA NRLLRDHPSY RVVALDKLDD YCATLNNLAP AMASPNFAFV RGDVASADLV LHLLLAERIN
101: TVMHFAAHTH VDDNSFEFTK NNVLGTHVLL EPCRRKAPPA PSAASSTSAP TRSTATLPRR ATTRHLKPCH QPVLRVQGRR RDARHGVRAL APTASRRSPR
201: AATTCTARAS SRRSSSPSSS SSPCAAASEL PVHGDVRLPP RPELPLLRRR SRGVRRRAPP GEVGVAEGDR RRPPCLRRVR ARPRRGRRDG ERPAVQRPQV
301: FRRRLEAQGA GVVGADAMGG GDQEDGGVVR RARR

Best Arabidopsis Sequence Match ( AT1G78570.1 )
(BLAST)

001: MASYTPKNIL ITGAAGFIAS HVANRLIRSY PDYKIVVLDK LDYCSNLKNL NPSKHSPNFK FVKGDIASAD LVNHLLITEG IDTIMHFAAQ THVDNSFGNS
101: FEFTKNNIYG THVLLEACKV TGQIRRFIHV STDEVYGETD EDALVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP VITTRGNNVY GPNQFPEKLI
201: PKFILLAMRG QVLPIHGDGS NVRSYLYCED VAEAFEVVLH KGEVGHVYNI GTKKERRVND VAKDICKLFN MDPEANIKFV DNRPFNDQRY FLDDQKLKKL
301: GWSERTTWEE GLKKTMDWYT QNPEWWGDVS GALLPHPRML MMPGGRHFDG SEDNSLAATL SEKPSQTHMV VPSQRSNGTP QKPSLKFLIY GKTGWIGGLL
401: GKICDKQGIA YEYGKGRLED RSSLLQDIQS VKPTHVFNSA GVTGRPNVDW CESHKTETIR ANVAGTLTLA DVCREHGLLM MNFATGCIFE YDDKHPEGSG
501: IGFKEEDTPN FTGSFYSKTK AMVEELLKEY DNVCTLRVRM PISSDLNNPR NFITKISRYN KVVNIPNSMT VLDELLPISI EMAKRNLKGI WNFTNPGVVS
601: HNEILEMYRD YINPEFKWAN FTLEEQAKVI VAPRSNNEMD ASKLKKEFPE LLSIKESLIK YAYGPNKKT

Arabidopsis Description

RHM1Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM5]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.