Factsheet for GSMUA_Achr3P15490_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P08110_001
GSMUA_Achr2P16670_001
GSMUA_Achr3P25020_001
GSMUA_Achr3P25880_001
GSMUA_Achr4P00500_001
GSMUA_Achr6P00950_001
GSMUA_Achr6P02720_001
GSMUA_Achr6P25560_001
GSMUA_Achr7P09190_001
GSMUA_Achr7P17990_001
GSMUA_Achr7P20990_001
GSMUA_Achr8P05490_001
GSMUA_Achr8P05800_001
GSMUA_Achr9P08680_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	GSMUA_Achr10P...	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr2P08110_001	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr6P25560_001	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr9P08680_001	AT4G09570.1	19130088
AT1G28480.1	GSMUA_Achr2P16670_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr3P25880_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr6P00950_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr7P09190_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr8P05490_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_AchrUn_...	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr4P00500_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr6P02720_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr7P17990_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr7P20990_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr10P...	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr11P...	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr3P25020_001	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr8P05800_001	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P27020_001	Banana	cytosol	51.69	64.89
TraesCS7D01G442400.1	Wheat	cytosol	52.54	55.86
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	49.15	54.21
TraesCS1D01G405200.1	Wheat	plastid	59.32	53.03
TraesCS3D01G244800.1	Wheat	plastid	61.86	52.9
GSMUA_Achr10P...	Banana	cytosol	54.24	52.46
TraesCS3A01G246700.1	Wheat	plastid	61.02	52.17
TraesCS5A01G096900.1	Wheat	cytosol	41.53	51.58
TraesCS3B01G272600.1	Wheat	plastid	59.32	51.09
Bra030545.1-P	Field mustard	cytosol	40.68	51.06
TraesCS1B01G425500.1	Wheat	cytosol	58.47	50.74
TraesCS1B01G425200.1	Wheat	plastid	60.17	49.31
TraesCS1D01G404800.1	Wheat	cytosol	60.17	48.97
TraesCS1A01G396900.1	Wheat	cytosol	60.17	48.97
HORVU3Hr1G061080.1	Barley	plastid	57.63	48.92
Os01t0667900-01	Rice	cytosol	60.17	48.3
Zm00001d039011_P001	Maize	cytosol	58.47	47.92
TraesCS6B01G132800.1	Wheat	cytosol	55.93	47.14
GSMUA_Achr7P10990_001	Banana	cytosol	57.63	46.58
TraesCS5A01G064100.1	Wheat	cytosol	54.24	46.38
OQU78423	Sorghum	cytosol, mitochondrion	58.47	46.31
Zm00001d009568_P001	Maize	cytosol	52.54	46.27
HORVU1Hr1G092260.1	Barley	mitochondrion	59.32	46.05
AT1G28480.1	Thale cress	cytosol	53.39	45.99
TraesCS3A01G147400.1	Wheat	cytosol, plastid	54.24	45.39
VIT_12s0028g03010.t01	Wine grape	cytosol	54.24	45.39
CDY15662	Canola	cytosol	49.15	45.31
TraesCS4A01G254400.1	Wheat	plastid	52.54	44.6
CDX94626	Canola	cytosol	48.31	44.53
TraesCS2A01G232700.1	Wheat	cytosol	50.85	44.12
Solyc10g008150.1.1	Tomato	cytosol	40.68	44.04
Zm00001d043932_P001	Maize	cytosol	59.32	44.03
CDY30815	Canola	cytosol	47.46	43.75
Zm00001d011543_P001	Maize	extracellular	58.47	43.4
Bra030102.1-P	Field mustard	cytosol	50.0	43.38
KRH20376	Soybean	plastid	50.0	43.38
KRH21345	Soybean	plastid	48.31	42.86
TraesCS4A01G254500.1	Wheat	plastid	53.39	42.86
Bra032911.1-P	Field mustard	cytosol	49.15	42.34
CDY34097	Canola	cytosol	49.15	42.34
HORVU2Hr1G057870.1	Barley	cytosol	57.63	41.98
EES03406	Sorghum	cytosol, plastid	59.32	41.67
KRH10949	Soybean	cytosol	46.61	41.35
TraesCS1A01G397200.1	Wheat	plastid	56.78	40.61
Solyc10g008930.1.1	Tomato	cytosol	42.37	39.37
KRH26996	Soybean	mitochondrion	52.54	38.75
CDY18190	Canola	plastid	50.85	38.71
VIT_10s0003g00390.t01	Wine grape	cytosol	49.15	38.67
HORVU1Hr1G087630.3	Barley	mitochondrion	57.63	38.42
PGSC0003DMT400056253	Potato	plastid	46.61	38.19
Bra015272.1-P	Field mustard	plastid	50.0	38.06
Solyc07g053550.1.1	Tomato	cytosol	47.46	37.84
CDX89861	Canola	plastid	49.15	37.42
PGSC0003DMT400024317	Potato	plastid	47.46	37.33
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	54.24	37.21
KRH22331	Soybean	mitochondrion	54.24	36.78
HORVU1Hr1G087600.1	Barley	plastid	58.47	36.51
HORVU3Hr1G065250.1	Barley	plastid	50.85	35.71
Bra032540.1-P	Field mustard	plastid	45.76	35.06
CDY32516	Canola	plastid	45.76	35.06
CDY10096	Canola	plastid	45.76	35.06
GSMUA_Achr7P13560_001	Banana	cytosol	32.2	33.93
KRH55866	Soybean	cytosol, plastid	49.15	33.72
KRH25663	Soybean	cytosol, plastid	49.15	33.53
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	33.9	32.52
Solyc02g077580.1.1	Tomato	cytosol, plastid	38.98	32.17
VIT_00s0199g00290.t01	Wine grape	extracellular	32.2	31.93
GSMUA_Achr10P...	Banana	mitochondrion	33.05	31.2
AT1G03850.1	Thale cress	cytosol	40.68	30.19
PGSC0003DMT400058776	Potato	plastid	45.76	30.0
CDY44992	Canola	cytosol	45.76	27.98

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G15490_001	EnsemblPlants:GSMUA_Achr3P15490_001
EnsemblPlants:GSMUA_Achr3T15490_001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0SEW5	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF69	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000294D9E0
SEG:seg	:	:	:	:	:

Description

Putative Monothiol glutaredoxin-S5 [Source:GMGC_GENE;Acc:GSMUA_Achr3G15490_001]

Coordinates

chr3:+:16517307..16517741

Molecular Weight (calculated)

12327.2 Da

IEP (calculated)

8.800

GRAVY (calculated)

0.449

Length

118 amino acids

Sequence
(BLAST)

001: MQDAIPYRSA RGWFPTSPSS SSASPSSSSL GGVTVRMMVA ENPVVVVGRR SCCMVDVARR LLLGLGVNPV VREIGEEAAA LPVVFVGGRL LGGLDRLVTA
101: HITGDLVPIL KDAGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.