CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX90725
CDY05064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	CDX90725	AT4G09570.1	19130088
AT1G03850.1	CDY05064	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89861	Canola	plastid	93.55	93.55
CDY32516	Canola	plastid	73.55	74.03
CDY10096	Canola	plastid	72.9	73.38
CDY44992	Canola	cytosol	71.61	57.51
GSMUA_Achr3P15490_001	Banana	plastid	38.71	50.85
AT1G03850.1	Thale cress	cytosol	50.97	49.69
Solyc10g008150.1.1	Tomato	cytosol	33.55	47.71
GSMUA_Achr6P27020_001	Banana	cytosol	28.39	46.81
TraesCS7D01G442400.1	Wheat	cytosol	30.97	43.24
TraesCS5A01G096900.1	Wheat	cytosol	26.45	43.16
VIT_12s0028g03010.t01	Wine grape	cytosol	38.71	42.55
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	29.03	42.06
CDY15662	Canola	cytosol	34.19	41.41
Solyc07g053550.1.1	Tomato	cytosol	39.35	41.22
CDX94626	Canola	cytosol	33.55	40.62
CDY30815	Canola	cytosol	33.55	40.62
GSMUA_Achr10P...	Banana	cytosol	31.61	40.16
PGSC0003DMT400056253	Potato	plastid	36.77	39.58
TraesCS3B01G272600.1	Wheat	plastid	34.84	39.42
TraesCS3D01G169500.1	Wheat	cytosol	28.39	39.29
TraesCS3B01G194500.1	Wheat	cytosol	28.39	39.29
TraesCS3D01G244800.1	Wheat	plastid	34.84	39.13
Zm00001d039011_P001	Maize	cytosol	36.13	38.89
HORVU3Hr1G061080.1	Barley	plastid	34.84	38.85
Zm00001d009568_P001	Maize	cytosol	33.55	38.81
CDY34097	Canola	cytosol	34.19	38.69
PGSC0003DMT400024317	Potato	plastid	37.42	38.67
TraesCS3A01G246700.1	Wheat	plastid	34.19	38.41
KRH26996	Soybean	mitochondrion	39.35	38.12
TraesCS1D01G405200.1	Wheat	plastid	32.26	37.88
KRH55866	Soybean	cytosol, plastid	41.94	37.79
KRH25663	Soybean	cytosol, plastid	41.94	37.57
HORVU2Hr1G026710.1	Barley	cytosol	27.1	37.5
Os01t0667900-01	Rice	cytosol	35.48	37.41
OQU78423	Sorghum	cytosol, mitochondrion	35.48	36.91
GSMUA_Achr7P10990_001	Banana	cytosol	34.19	36.3
TraesCS1B01G425500.1	Wheat	cytosol	31.61	36.03
TraesCS2B01G174000.1	Wheat	cytosol	25.81	35.71
TraesCS2A01G149100.1	Wheat	cytosol	25.81	35.71
KRH22331	Soybean	mitochondrion	40.0	35.63
TraesCS6B01G132800.1	Wheat	cytosol	31.61	35.0
TraesCS1B01G425200.1	Wheat	plastid	32.26	34.72
TraesCS1A01G396900.1	Wheat	cytosol	32.26	34.48
TraesCS1D01G404800.1	Wheat	cytosol	32.26	34.48
CDX78456	Canola	plastid	30.97	34.29
CDX70434	Canola	cytosol, plastid	30.97	34.29
HORVU1Hr1G092260.1	Barley	mitochondrion	32.9	33.55
CDX75319	Canola	cytosol	30.97	33.33
EES03406	Sorghum	cytosol, plastid	35.48	32.74
CDX68934	Canola	cytosol	30.32	32.64
TraesCS5A01G064100.1	Wheat	cytosol	29.03	32.61
Os01t0241400-01	Rice	cytosol, plastid	28.39	32.35
CDX69718	Canola	cytosol, plastid	29.03	32.14
CDX97156	Canola	cytosol, plastid	29.03	32.14
Zm00001d043932_P001	Maize	cytosol	32.9	32.08
Zm00001d011543_P001	Maize	extracellular	32.9	32.08
CDY28280	Canola	cytosol	29.68	31.94
CDX72386	Canola	cytosol	29.03	31.91
CDY13515	Canola	cytosol	29.03	31.91
TraesCS4A01G254500.1	Wheat	plastid	29.68	31.29
CDY45025	Canola	cytosol	29.03	31.25
TraesCS3A01G147400.1	Wheat	cytosol, plastid	28.39	31.21
TraesCS4A01G254400.1	Wheat	plastid	27.74	30.94
TraesCS2A01G232700.1	Wheat	cytosol	27.1	30.88
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	33.55	30.23
TraesCS1A01G397200.1	Wheat	plastid	31.61	29.7
HORVU2Hr1G057870.1	Barley	cytosol	30.97	29.63
HORVU3Hr1G032820.1	Barley	plastid	29.03	29.22
HORVU1Hr1G087630.3	Barley	mitochondrion	32.9	28.81
HORVU3Hr1G065250.1	Barley	plastid	29.68	27.38
HORVU1Hr1G087600.1	Barley	plastid	32.26	26.45
TraesCS2D01G153900.1	Wheat	cytosol	28.39	26.19
TraesCS3A01G163500.1	Wheat	plastid	26.45	24.4

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:A0A078FUR3	UniProt:A0A078FUR3	EnsemblPlants:CDY18190	ProteinID:CDY18190
ProteinID:CDY18190.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00002718001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF111	SUPFAM:SSF52833
TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EEA90B	SEG:seg	:	:

Description

BnaC05g02130DBnaC05g02130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUR3]

Coordinates

chrLK032083:-:228885..229530

Molecular Weight (calculated)

16939.5 Da

IEP (calculated)

9.635

GRAVY (calculated)

-0.143

Length

155 amino acids

Sequence
(BLAST)

001: MQKAIRQYES SWTKTTPANS IFRPKNEDKP SSSLSWLTSS PSPQKPSSSS TKKSSYNVLV MENAVVVFAR RGCCMGHVVK RLLLTHGVNP LVVEIGEEDN
101: SDIIISDLGK TVINKENLPV MFIGGKLFGG LENLMAAHIN GDLVPTLRQA GALWL

Best Arabidopsis Sequence Match ( AT1G03850.2 )
(BLAST)

001: MQKAIRPYES PWTKTVPGNS IFLLKNEDKP SSSSSSLSWL TSGSPKPTSI SNKRSSNLVV MENAVVVFAR RGCCLGHVAK RLLLTHGVNP VVVEIGEEDN
101: NNYDNIVSDK EKLPMMYIGG KLFGGLENLM AAHINGDLVP TLRQAGALWL

Arabidopsis Description

Glutaredoxin family protein [Source:TAIR;Acc:AT1G03850]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.