CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006132.1-P	Field mustard	extracellular	50.71	100.0
CDX70434	Canola	cytosol, plastid	98.57	98.57
CDX69718	Canola	cytosol, plastid	78.57	78.57
CDX97156	Canola	cytosol, plastid	78.57	78.57
AT5G11930.1	Thale cress	cytosol, plastid	80.71	76.35
CDX72386	Canola	cytosol	60.0	59.57
VIT_04s0008g01120.t01	Wine grape	cytosol	57.86	59.12
CDX68934	Canola	cytosol	59.29	57.64
CDX75319	Canola	cytosol	58.57	56.94
CDY13515	Canola	cytosol	57.14	56.74
CDY28280	Canola	cytosol	57.14	55.56
CDY45025	Canola	cytosol	56.43	54.86
Solyc08g062970.1.1	Tomato	cytosol	50.71	51.08
Solyc11g069940.1.1	Tomato	cytosol	50.0	49.3
Zm00001d008843_P001	Maize	cytosol	40.0	46.67
TraesCS3D01G107400.1	Wheat	cytosol	40.0	46.67
TraesCS3B01G123700.1	Wheat	cytosol	40.0	46.67
TraesCS3A01G105300.1	Wheat	cytosol	40.0	46.67
PGSC0003DMT400050646	Potato	cytosol	46.43	45.14
EES02308	Sorghum	cytosol	38.57	45.0
GSMUA_Achr7P13560_001	Banana	cytosol	35.71	44.64
Zm00001d039468_P001	Maize	cytosol	37.86	44.17
PGSC0003DMT400021236	Potato	cytosol	44.29	43.06
Zm00001d037757_P001	Maize	cytosol	37.14	42.62
Os01t0194600-02	Rice	cytosol	37.14	41.6
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	35.71	40.65
Os05t0198200-00	Rice	cytosol	40.0	40.58
EES17851	Sorghum	cytosol	42.14	40.41
GSMUA_Achr10P...	Banana	mitochondrion	34.29	38.4
CDY34097	Canola	cytosol	32.14	32.85
CDY30815	Canola	cytosol	30.0	32.81
CDY15662	Canola	cytosol	28.57	31.25
CDX94626	Canola	cytosol	28.57	31.25
CDY32516	Canola	plastid	34.29	31.17
CDY10096	Canola	plastid	34.29	31.17
CDX89861	Canola	plastid	34.29	30.97
CDY18190	Canola	plastid	34.29	30.97
CDY44992	Canola	cytosol	34.29	24.87

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:A0A078CMQ2	EnsemblPlants:CDX78456	ProteinID:CDX78456	ProteinID:CDX78456.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00129844001	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF178
SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0001BFBE82	SEG:seg	:

Description

BnaA03g03680D

Coordinates

chrLK031815:-:850543..850965

Molecular Weight (calculated)

15034.2 Da

IEP (calculated)

4.692

GRAVY (calculated)

0.322

Length

140 amino acids

Sequence
(BLAST)

001: MKTMQGLRNF TNDNVSLDLT FPPPAPPPIS SSTASTSLSF DEEETSASKI ERLISEHPVI IFTRSSTCCM CHVMKKLLST VGVHPTVIEI DEEEIACLAV
101: QAAPVLFIGG ACVGGFESLV ALHLSGHLIP RLVEVGALWE

Best Arabidopsis Sequence Match ( AT5G11930.1 )
(BLAST)

001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA

Arabidopsis Description

GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.