Factsheet for GSMUA_Achr10P21280_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	75.2	76.42
GSMUA_Achr7P13560_001	Banana	cytosol	64.8	72.32
Zm00001d008843_P001	Maize	cytosol	55.2	57.5
Zm00001d039468_P001	Maize	cytosol	54.4	56.67
Os01t0194600-02	Rice	cytosol	53.6	53.6
TraesCS3A01G105300.1	Wheat	cytosol	51.2	53.33
TraesCS3B01G123700.1	Wheat	cytosol	51.2	53.33
TraesCS3D01G107400.1	Wheat	cytosol	51.2	53.33
Bra006132.1-P	Field mustard	extracellular	29.6	52.11
EES02308	Sorghum	cytosol	49.6	51.67
Zm00001d037757_P001	Maize	cytosol	50.4	51.64
Os05t0198200-00	Rice	cytosol	49.6	44.93
GSMUA_Achr6P27020_001	Banana	cytosol	31.2	41.49
EES17851	Sorghum	cytosol	47.2	40.41
VIT_04s0008g01120.t01	Wine grape	cytosol	43.2	39.42
Solyc08g062970.1.1	Tomato	cytosol	42.4	38.13
Solyc11g069940.1.1	Tomato	cytosol	42.4	37.32
CDX72386	Canola	cytosol	40.8	36.17
KRH61512	Soybean	cytosol	39.2	36.03
KRH52204	Soybean	cytosol	40.0	35.71
KRH15571	Soybean	cytosol	40.0	35.46
Bra037028.1-P	Field mustard	cytosol	40.0	35.46
CDY13515	Canola	cytosol	40.0	35.46
CDX68934	Canola	cytosol	40.8	35.42
PGSC0003DMT400021236	Potato	cytosol	40.8	35.42
AT4G33040.1	Thale cress	cytosol	40.8	35.42
CDX69718	Canola	cytosol, plastid	39.2	35.0
CDX70434	Canola	cytosol, plastid	39.2	35.0
Bra008925.1-P	Field mustard	cytosol, plastid	39.2	35.0
CDX97156	Canola	cytosol, plastid	39.2	35.0
CDX75319	Canola	cytosol	40.0	34.72
CDX78456	Canola	plastid	38.4	34.29
Bra011408.1-P	Field mustard	cytosol	39.2	34.27
PGSC0003DMT400050646	Potato	cytosol	39.2	34.03
KRH05438	Soybean	cytosol	40.0	34.01
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	28.8	33.64
GSMUA_Achr3P15490_001	Banana	plastid	31.2	33.05
GSMUA_Achr10P...	Banana	cytosol	32.0	32.79
Bra034545.1-P	Field mustard	cytosol	37.6	32.64
CDY45025	Canola	cytosol	36.8	31.94
CDY28280	Canola	cytosol	36.8	31.94
AT5G11930.1	Thale cress	cytosol, plastid	37.6	31.76
GSMUA_Achr7P10990_001	Banana	cytosol	36.0	30.82
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	32.0	23.26

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G21280_001	EnsemblPlants:GSMUA_Achr10P21280_001
EnsemblPlants:GSMUA_Achr10T21280_001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0RK53	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF56	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000294F783
SEG:seg	:	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G21280_001]

Coordinates

chr10:-:26964454..26965341

Molecular Weight (calculated)

12757.8 Da

IEP (calculated)

7.519

GRAVY (calculated)

0.402

Length

125 amino acids

Sequence
(BLAST)

001: MAAVAAAVAR GKKRGTAVLS IDGADEAPEV RVARLIRENP AVIFNRRECC MSHVMKRLLA VVGAHPAAIE LQEADEEAAA AAAGDGGLPA LFVGGVAVGG
101: LEGLMGLHLR GGLVPMLREA GALRI

Best Arabidopsis Sequence Match ( AT4G33040.1 )
(BLAST)

001: MMQELGLQRF SNDVVRLDLT PPSQTSSTSL SIDEEESTEA KIRRLISEHP VIIFSRSSCC MCHVMKRLLA TIGVIPTVIE LDDHEVSSLP TALQDEYSGG
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV

Arabidopsis Description

GRXC6Glutaredoxin-C6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.