Factsheet for PGSC0003DMT400021236

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g062970.1.1	Tomato	cytosol	76.39	79.14
Bra006132.1-P	Field mustard	extracellular	30.56	61.97
VIT_04s0008g01120.t01	Wine grape	cytosol	56.94	59.85
PGSC0003DMT400050646	Potato	cytosol	56.94	56.94
KRH15571	Soybean	cytosol	53.47	54.61
KRH61512	Soybean	cytosol	50.0	52.94
KRH05438	Soybean	cytosol	52.78	51.7
KRH52204	Soybean	cytosol	49.31	50.71
AT4G33040.1	Thale cress	cytosol	50.69	50.69
CDY28280	Canola	cytosol	50.69	50.69
CDX75319	Canola	cytosol	50.0	50.0
Bra011408.1-P	Field mustard	cytosol	49.31	49.65
CDX72386	Canola	cytosol	48.61	49.65
Bra034545.1-P	Field mustard	cytosol	49.31	49.31
CDY45025	Canola	cytosol	49.31	49.31
CDY13515	Canola	cytosol	47.92	48.94
Bra037028.1-P	Field mustard	cytosol	47.92	48.94
CDX68934	Canola	cytosol	48.61	48.61
Zm00001d037757_P001	Maize	cytosol	38.89	45.9
CDX69718	Canola	cytosol, plastid	44.44	45.71
CDX70434	Canola	cytosol, plastid	44.44	45.71
CDX97156	Canola	cytosol, plastid	44.44	45.71
Zm00001d008843_P001	Maize	cytosol	37.5	45.0
Bra008925.1-P	Field mustard	cytosol, plastid	43.75	45.0
GSMUA_Achr7P13560_001	Banana	cytosol	34.72	44.64
CDX78456	Canola	plastid	43.06	44.29
Zm00001d039468_P001	Maize	cytosol	36.81	44.17
EES02308	Sorghum	cytosol	36.11	43.33
AT5G11930.1	Thale cress	cytosol, plastid	44.44	43.24
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	36.81	43.09
TraesCS3A01G105300.1	Wheat	cytosol	35.42	42.5
TraesCS3B01G123700.1	Wheat	cytosol	35.42	42.5
TraesCS3D01G107400.1	Wheat	cytosol	35.42	42.5
Os05t0198200-00	Rice	cytosol	40.28	42.03
Os01t0194600-02	Rice	cytosol	35.42	40.8
GSMUA_Achr10P...	Banana	mitochondrion	35.42	40.8
EES17851	Sorghum	cytosol	40.28	39.73
PGSC0003DMT400056253	Potato	plastid	25.0	25.0
PGSC0003DMT400058776	Potato	plastid	27.78	22.22
PGSC0003DMT400024317	Potato	plastid	22.22	21.33

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:IPR002109	UniProt:M1AET9	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400008224	PGSC:PGSC0003DMG400008224	EnsemblPlants:PGSC0003DMT400021236
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF56	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI0002965F4F	:	:	:	:	:

Description

Glutaredoxin [Source:PGSC_GENE;Acc:PGSC0003DMG400008224]

Coordinates

chr8:-:35449627..35450329

Molecular Weight (calculated)

15486.8 Da

IEP (calculated)

5.155

GRAVY (calculated)

0.242

Length

144 amino acids

Sequence
(BLAST)

001: MMRTNNFYGE GGVRLELAPS TTSPLAIDVT ESTEMRIQRL ISENPVVIFT RSSCCMCHVM KKLLSAIGVY PTVIELEEEE ISALPPSSAG DLDDHHHVNN
101: IPADAPAVFI GGTRVGGLES LVALHLSGRL VPKLVEVGVI THVV

Best Arabidopsis Sequence Match ( AT4G33040.1 )
(BLAST)

001: MMQELGLQRF SNDVVRLDLT PPSQTSSTSL SIDEEESTEA KIRRLISEHP VIIFSRSSCC MCHVMKRLLA TIGVIPTVIE LDDHEVSSLP TALQDEYSGG
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV

Arabidopsis Description

GRXC6Glutaredoxin-C6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.