Factsheet for TraesCS3A01G105300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G123700.1	Wheat	cytosol	100.0	100.0
TraesCS3D01G107400.1	Wheat	cytosol	99.17	99.17
Os01t0194600-02	Rice	cytosol	80.83	77.6
Zm00001d008843_P001	Maize	cytosol	76.67	76.67
Zm00001d039468_P001	Maize	cytosol	75.83	75.83
EES02308	Sorghum	cytosol	74.17	74.17
GSMUA_Achr7P13560_001	Banana	cytosol	55.83	59.82
Bra006132.1-P	Field mustard	extracellular	33.33	56.34
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	57.5	56.1
GSMUA_Achr10P...	Banana	mitochondrion	53.33	51.2
VIT_04s0008g01120.t01	Wine grape	cytosol	45.83	40.15
CDX78456	Canola	plastid	46.67	40.0
CDX70434	Canola	cytosol, plastid	45.83	39.29
CDX97156	Canola	cytosol, plastid	45.0	38.57
CDX69718	Canola	cytosol, plastid	45.0	38.57
Solyc08g062970.1.1	Tomato	cytosol	44.17	38.13
Bra008925.1-P	Field mustard	cytosol, plastid	44.17	37.86
KRH61512	Soybean	cytosol	42.5	37.5
Solyc11g069940.1.1	Tomato	cytosol	44.17	37.32
CDX72386	Canola	cytosol	43.33	36.88
Bra011408.1-P	Field mustard	cytosol	43.33	36.36
CDY13515	Canola	cytosol	42.5	36.17
Bra037028.1-P	Field mustard	cytosol	42.5	36.17
CDX75319	Canola	cytosol	43.33	36.11
AT5G11930.1	Thale cress	cytosol, plastid	44.17	35.81
TraesCS5A01G096900.1	Wheat	cytosol	28.33	35.79
KRH15571	Soybean	cytosol	41.67	35.46
PGSC0003DMT400021236	Potato	cytosol	42.5	35.42
AT4G33040.1	Thale cress	cytosol	42.5	35.42
CDX68934	Canola	cytosol	42.5	35.42
PGSC0003DMT400050646	Potato	cytosol	42.5	35.42
CDY28280	Canola	cytosol	41.67	34.72
KRH05438	Soybean	cytosol	41.67	34.01
KRH52204	Soybean	cytosol	38.33	32.86
CDY45025	Canola	cytosol	39.17	32.64
Bra034545.1-P	Field mustard	cytosol	38.33	31.94
TraesCS3A01G246700.1	Wheat	plastid	36.67	31.88
TraesCS5A01G064100.1	Wheat	cytosol	34.17	29.71
TraesCS1A01G396900.1	Wheat	cytosol	35.83	29.66
TraesCS3A01G147400.1	Wheat	cytosol, plastid	33.33	28.37
TraesCS2A01G232700.1	Wheat	cytosol	31.67	27.94
TraesCS2A01G149100.1	Wheat	cytosol	25.0	26.79
TraesCS4A01G254400.1	Wheat	plastid	30.83	26.62
TraesCS4A01G254500.1	Wheat	plastid	31.67	25.85
TraesCS1A01G397200.1	Wheat	plastid	33.33	24.24
TraesCS3A01G163500.1	Wheat	plastid	27.5	19.64

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgr	InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF114	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3A01G105300	EnsemblPlants:TraesCS3A01G105300.1

Description

No Description!

Coordinates

chr3A:+:69098083..69100290

Molecular Weight (calculated)

12369.3 Da

IEP (calculated)

7.687

GRAVY (calculated)

0.365

Length

120 amino acids

Sequence
(BLAST)

001: MQAVAGIRRG LTIDPAGEEE APAQRFGRLV RESPVVIFAR RGCYMAHVMK SLLAAVGAHA TVIELEGPAE ERAAVEAGGH AAVPALFVGG APVGGLEGLM
101: GLHLSGLLVP RLREVGALRA

Best Arabidopsis Sequence Match ( AT5G11930.1 )
(BLAST)

001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA

Arabidopsis Description

GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.