Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75319 | Canola | cytosol | 88.89 | 88.89 |
| AT4G33040.1 | Thale cress | cytosol | 88.19 | 88.19 |
| CDY45025 | Canola | cytosol | 87.5 | 87.5 |
| CDX68934 | Canola | cytosol | 85.42 | 85.42 |
| CDY13515 | Canola | cytosol | 81.25 | 82.98 |
| CDX72386 | Canola | cytosol | 78.47 | 80.14 |
| KRH15571 | Soybean | cytosol | 61.11 | 62.41 |
| VIT_04s0008g01120.t01 | Wine grape | cytosol | 56.25 | 59.12 |
| CDX70434 | Canola | cytosol, plastid | 56.94 | 58.57 |
| KRH05438 | Soybean | cytosol | 59.03 | 57.82 |
| KRH61512 | Soybean | cytosol | 54.17 | 57.35 |
| CDX97156 | Canola | cytosol, plastid | 55.56 | 57.14 |
| CDX78456 | Canola | plastid | 55.56 | 57.14 |
| CDX69718 | Canola | cytosol, plastid | 55.56 | 57.14 |
| Solyc08g062970.1.1 | Tomato | cytosol | 52.08 | 53.96 |
| KRH52204 | Soybean | cytosol | 50.69 | 52.14 |
| PGSC0003DMT400021236 | Potato | cytosol | 50.69 | 50.69 |
| PGSC0003DMT400050646 | Potato | cytosol | 47.22 | 47.22 |
| Solyc11g069940.1.1 | Tomato | cytosol | 45.14 | 45.77 |
| Zm00001d008843_P001 | Maize | cytosol | 36.81 | 44.17 |
| Zm00001d039468_P001 | Maize | cytosol | 36.81 | 44.17 |
| GSMUA_Achr7P13560_001 | Banana | cytosol | 34.03 | 43.75 |
| EES02308 | Sorghum | cytosol | 36.11 | 43.33 |
| TraesCS3D01G107400.1 | Wheat | cytosol | 35.42 | 42.5 |
| TraesCS3B01G123700.1 | Wheat | cytosol | 34.72 | 41.67 |
| TraesCS3A01G105300.1 | Wheat | cytosol | 34.72 | 41.67 |
| Zm00001d037757_P001 | Maize | cytosol | 34.03 | 40.16 |
| CDY30815 | Canola | cytosol | 34.03 | 38.28 |
| CDY34097 | Canola | cytosol | 36.11 | 37.96 |
| Os01t0194600-02 | Rice | cytosol | 32.64 | 37.6 |
| GSMUA_Achr5P06460_001 | Banana | cytosol, mitochondrion | 31.94 | 37.4 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.94 | 36.8 |
| CDX94626 | Canola | cytosol | 32.64 | 36.72 |
| Os05t0198200-00 | Rice | cytosol | 34.72 | 36.23 |
| EES17851 | Sorghum | cytosol | 35.42 | 34.93 |
| CDY15662 | Canola | cytosol | 29.86 | 33.59 |
| CDY32516 | Canola | plastid | 31.94 | 29.87 |
| CDY18190 | Canola | plastid | 31.94 | 29.68 |
| CDY10096 | Canola | plastid | 31.25 | 29.22 |
| CDX89861 | Canola | plastid | 31.25 | 29.03 |
| CDY44992 | Canola | cytosol | 30.56 | 22.8 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078GNZ2 | UniProt:A0A078GNZ2 | EnsemblPlants:CDY28280 | ProteinID:CDY28280 |
| ProteinID:CDY28280.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00040020001 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF56 | SUPFAM:SSF52833 |
| TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001BFBE7F | SEG:seg | : | : |
Description
BnaC03g66790DBnaC03g66790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNZ2]
Coordinates
chrLK032217:-:74290..75541
Molecular Weight (calculated)
15733.1 Da
IEP (calculated)
4.506
GRAVY (calculated)
0.239
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQELGLERF SNDVFPLDLT PPSQTSSTSL SIDEEESSEA KIRRLISEHP VIIFSRSSCC MCHVMKSLLS TIGVVPTVIE LDDHEVSSLP MALEEEYSGG
101: RSVVVPPPAV FIGREYVGGL ESLVALHLSS HLVPKLVQVG ALWL
101: RSVVVPPPAV FIGREYVGGL ESLVALHLSS HLVPKLVQVG ALWL
001: MMQELGLQRF SNDVVRLDLT PPSQTSSTSL SIDEEESTEA KIRRLISEHP VIIFSRSSCC MCHVMKRLLA TIGVIPTVIE LDDHEVSSLP TALQDEYSGG
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV
Arabidopsis Description
GRXC6Glutaredoxin-C6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.