CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008843_P001	Maize	cytosol	82.5	82.5
Zm00001d039468_P001	Maize	cytosol	81.67	81.67
Os01t0194600-02	Rice	cytosol	78.33	75.2
TraesCS3D01G107400.1	Wheat	cytosol	74.17	74.17
TraesCS3B01G123700.1	Wheat	cytosol	74.17	74.17
TraesCS3A01G105300.1	Wheat	cytosol	74.17	74.17
GSMUA_Achr7P13560_001	Banana	cytosol	51.67	55.36
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	56.67	55.28
Bra006132.1-P	Field mustard	extracellular	30.83	52.11
GSMUA_Achr10P...	Banana	mitochondrion	51.67	49.6
EES17851	Sorghum	cytosol	60.0	49.32
VIT_04s0008g01120.t01	Wine grape	cytosol	47.5	41.61
Solyc08g062970.1.1	Tomato	cytosol	46.67	40.29
CDX78456	Canola	plastid	45.0	38.57
CDX70434	Canola	cytosol, plastid	44.17	37.86
Bra011408.1-P	Field mustard	cytosol	45.0	37.76
CDY13515	Canola	cytosol	44.17	37.59
CDX72386	Canola	cytosol	44.17	37.59
Bra037028.1-P	Field mustard	cytosol	44.17	37.59
CDX75319	Canola	cytosol	45.0	37.5
Solyc11g069940.1.1	Tomato	cytosol	44.17	37.32
KRH15571	Soybean	cytosol	43.33	36.88
CDX68934	Canola	cytosol	44.17	36.81
PGSC0003DMT400050646	Potato	cytosol	44.17	36.81
KRH61512	Soybean	cytosol	41.67	36.76
CDX69718	Canola	cytosol, plastid	42.5	36.43
CDX97156	Canola	cytosol, plastid	42.5	36.43
AT4G33040.1	Thale cress	cytosol	43.33	36.11
CDY45025	Canola	cytosol	43.33	36.11
CDY28280	Canola	cytosol	43.33	36.11
PGSC0003DMT400021236	Potato	cytosol	43.33	36.11
Bra008925.1-P	Field mustard	cytosol, plastid	41.67	35.71
Bra034545.1-P	Field mustard	cytosol	42.5	35.42
AT5G11930.1	Thale cress	cytosol, plastid	43.33	35.14
KRH05438	Soybean	cytosol	42.5	34.69
KRH52204	Soybean	cytosol	36.67	31.43
OQU78423	Sorghum	cytosol, mitochondrion	35.83	28.86
EES03406	Sorghum	cytosol, plastid	40.0	28.57

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EntrezGene:8084345	UniProt:C5XLW6	EnsemblPlants:EES02308	ProteinID:EES02308
ProteinID:EES02308.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF114	EnsemblPlantsGene:SORBI_3003G031900	SUPFAM:SSF52833
TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A84F68	RefSeq:XP_002457188.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:2948882..2949739

Molecular Weight (calculated)

12288.1 Da

IEP (calculated)

4.906

GRAVY (calculated)

0.310

Length

120 amino acids

Sequence
(BLAST)

001: MQAVGIRRGL TIDPAGEEEP AAARVGRLVR ESPVVIFARP GCCMAHVMKR LLQAVGAHAT VIELDAGAAE EEELAAGAEG AGVPALFVGG DPVGGLEGLM
101: ALHLSGRLEP RLRELGALCA

Best Arabidopsis Sequence Match ( AT5G11930.1 )
(BLAST)

001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA

Arabidopsis Description

GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.