Factsheet for Bra006132.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	extracellular
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78456	Canola	plastid	100.0	50.71
CDX70434	Canola	cytosol, plastid	100.0	50.71
Bra008925.1-P	Field mustard	cytosol, plastid	91.55	46.43
AT5G11930.1	Thale cress	cytosol, plastid	90.14	43.24
VIT_04s0008g01120.t01	Wine grape	cytosol	77.46	40.15
Bra030545.1-P	Field mustard	cytosol	47.89	36.17
Solyc08g062970.1.1	Tomato	cytosol	66.2	33.81
Solyc11g069940.1.1	Tomato	cytosol	67.61	33.8
TraesCS3D01G107400.1	Wheat	cytosol	56.34	33.33
TraesCS3B01G123700.1	Wheat	cytosol	56.34	33.33
TraesCS3A01G105300.1	Wheat	cytosol	56.34	33.33
GSMUA_Achr7P13560_001	Banana	cytosol	50.7	32.14
Zm00001d008843_P001	Maize	cytosol	53.52	31.67
Bra011408.1-P	Field mustard	cytosol	63.38	31.47
Bra037028.1-P	Field mustard	cytosol	61.97	31.21
Zm00001d037757_P001	Maize	cytosol	53.52	31.15
EES02308	Sorghum	cytosol	52.11	30.83
PGSC0003DMT400021236	Potato	cytosol	61.97	30.56
Bra034545.1-P	Field mustard	cytosol	61.97	30.56
Zm00001d039468_P001	Maize	cytosol	50.7	30.0
PGSC0003DMT400050646	Potato	cytosol	60.56	29.86
Os05t0198200-00	Rice	cytosol	57.75	29.71
GSMUA_Achr10P...	Banana	mitochondrion	52.11	29.6
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	50.7	29.27
Os01t0194600-02	Rice	cytosol	50.7	28.8
EES17851	Sorghum	cytosol	56.34	27.4
Bra030102.1-P	Field mustard	cytosol	47.89	25.0
Bra032911.1-P	Field mustard	cytosol	47.89	24.82
Bra032540.1-P	Field mustard	plastid	50.7	23.38
Bra015272.1-P	Field mustard	plastid	49.3	22.58

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra006132	EnsemblPlants:Bra006132.1	EnsemblPlants:Bra006132.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CPJ3	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF178	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000253F972	:	:

Description

AT5G11930 (E=2e-031) | glutaredoxin family protein

Coordinates

chrA03:-:2143637..2143852

Molecular Weight (calculated)

7519.4 Da

IEP (calculated)

4.899

GRAVY (calculated)

0.889

Length

71 amino acids

Sequence
(BLAST)

1: MCHVMKKLLS TVGVHPTVIE IDEEEIACLA VQAAPVLFIG GACVGGFESL VALHLSGHLI PRLVEVGALW E

Best Arabidopsis Sequence Match ( AT5G11930.1 )
(BLAST)

001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA

Arabidopsis Description

GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.