Factsheet for Bra032911.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018126.1-P
Bra027690.1-P
Bra028713.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G28480.1	Bra027690.1-P	AT1G64280.1	17397508
AT1G28480.1	Bra018126.1-P	AT3G47620.1	21798944
AT1G28480.1	Bra028713.1-P	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34097	Canola	cytosol	100.0	100.0
AT1G28480.1	Thale cress	cytosol	78.1	78.1
Bra030102.1-P	Field mustard	cytosol	65.69	66.18
TraesCS7D01G442400.1	Wheat	cytosol	45.99	56.76
TraesCS5A01G096900.1	Wheat	cytosol	37.96	54.74
GSMUA_Achr6P27020_001	Banana	cytosol	37.23	54.26
Bra030545.1-P	Field mustard	cytosol	36.5	53.19
KRH21345	Soybean	plastid	49.63	51.13
GSMUA_Achr3P15490_001	Banana	plastid	42.34	49.15
KRH10949	Soybean	cytosol	47.45	48.87
TraesCS1B01G425500.1	Wheat	cytosol	48.18	48.53
Bra006132.1-P	Field mustard	extracellular	24.82	47.89
TraesCS1D01G405200.1	Wheat	plastid	45.99	47.73
KRH20376	Soybean	plastid	45.99	46.32
TraesCS1D01G404800.1	Wheat	cytosol	48.18	45.52
TraesCS1A01G396900.1	Wheat	cytosol	48.18	45.52
TraesCS1B01G425200.1	Wheat	plastid	47.45	45.14
TraesCS6B01G132800.1	Wheat	cytosol	45.99	45.0
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	35.04	44.86
GSMUA_Achr10P...	Banana	cytosol	39.42	44.26
Zm00001d009568_P001	Maize	cytosol	43.07	44.03
TraesCS3B01G194500.1	Wheat	cytosol	35.77	43.75
OQU78423	Sorghum	cytosol, mitochondrion	46.72	42.95
TraesCS3D01G169500.1	Wheat	cytosol	35.04	42.86
TraesCS3A01G246700.1	Wheat	plastid	43.07	42.75
TraesCS3D01G244800.1	Wheat	plastid	43.07	42.75
TraesCS3A01G147400.1	Wheat	cytosol, plastid	43.8	42.55
Os01t0241400-01	Rice	cytosol, plastid	41.61	41.91
HORVU1Hr1G092260.1	Barley	mitochondrion	45.99	41.45
TraesCS2A01G232700.1	Wheat	cytosol	40.88	41.18
Zm00001d039011_P001	Maize	cytosol	43.07	40.97
TraesCS3B01G272600.1	Wheat	plastid	40.88	40.88
Os01t0667900-01	Rice	cytosol	43.8	40.82
GSMUA_Achr7P10990_001	Banana	cytosol	43.07	40.41
TraesCS4A01G254400.1	Wheat	plastid	40.88	40.29
HORVU3Hr1G061080.1	Barley	plastid	40.88	40.29
HORVU2Hr1G026710.1	Barley	cytosol	32.85	40.18
TraesCS4A01G254500.1	Wheat	plastid	43.07	40.14
TraesCS5A01G064100.1	Wheat	cytosol	40.15	39.86
TraesCS2A01G149100.1	Wheat	cytosol	31.39	38.39
TraesCS2B01G174000.1	Wheat	cytosol	31.39	38.39
HORVU2Hr1G057870.1	Barley	cytosol	45.26	38.27
Zm00001d043932_P001	Maize	cytosol	43.8	37.74
TraesCS1A01G397200.1	Wheat	plastid	45.26	37.58
Zm00001d011543_P001	Maize	extracellular	42.34	36.48
Bra032540.1-P	Field mustard	plastid	40.15	35.71
HORVU3Hr1G065250.1	Barley	plastid	43.8	35.71
Bra011408.1-P	Field mustard	cytosol	37.23	35.66
HORVU1Hr1G087630.3	Barley	mitochondrion	45.99	35.59
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	44.53	35.47
EES03406	Sorghum	cytosol, plastid	42.34	34.52
HORVU1Hr1G087600.1	Barley	plastid	46.72	33.86
Bra015272.1-P	Field mustard	plastid	37.96	33.55
Bra034545.1-P	Field mustard	cytosol	35.04	33.33
Bra037028.1-P	Field mustard	cytosol	34.31	33.33
HORVU3Hr1G032820.1	Barley	plastid	35.04	31.17
Bra008925.1-P	Field mustard	cytosol, plastid	30.66	30.0
TraesCS3A01G163500.1	Wheat	plastid	34.31	27.98
TraesCS2D01G153900.1	Wheat	cytosol	30.66	25.0

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra032911	EnsemblPlants:Bra032911.1	EnsemblPlants:Bra032911.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4EVS8	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF69	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI000254249E	:	:	:	:	:

Description

AT1G28480 (E=9e-056) GRX480 | GRX480; electron carrier/ protein disulfide oxidoreductase

Coordinates

chrA09:+:11871172..11871585

Molecular Weight (calculated)

15018.6 Da

IEP (calculated)

5.711

GRAVY (calculated)

0.034

Length

137 amino acids

Sequence
(BLAST)

001: MQGTISCTRH YNMIPAAESP RPLPLKTEKT GENVRTLVEE NALIVIGRRG CCMCHVIKSL LLGLGVNPAV LEIDDQEKEE EVMSELERIG VEGGRERVKL
101: PAVYIGGRLF GGLDRVMATH ISGELVPILK DVGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.