Factsheet for GSMUA_Achr1P13880_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P08110_001
GSMUA_Achr2P16670_001
GSMUA_Achr3P25020_001
GSMUA_Achr3P25880_001
GSMUA_Achr4P00500_001
GSMUA_Achr6P00950_001
GSMUA_Achr6P02720_001
GSMUA_Achr6P25560_001
GSMUA_Achr7P09190_001
GSMUA_Achr7P17990_001
GSMUA_Achr7P20990_001
GSMUA_Achr8P05490_001
GSMUA_Achr8P05800_001
GSMUA_Achr9P08680_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	GSMUA_Achr10P...	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr2P08110_001	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr6P25560_001	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr9P08680_001	AT4G09570.1	19130088
AT1G28480.1	GSMUA_Achr2P16670_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr3P25880_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr6P00950_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr7P09190_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr8P05490_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_AchrUn_...	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr4P00500_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr6P02720_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr7P17990_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr7P20990_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr10P...	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr11P...	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr3P25020_001	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr8P05800_001	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P27020_001	Banana	cytosol	66.36	75.53
TraesCS5A01G096900.1	Wheat	cytosol	46.73	52.63
GSMUA_Achr10P...	Banana	cytosol	58.88	51.64
TraesCS7D01G442400.1	Wheat	cytosol	53.27	51.35
GSMUA_Achr3P15490_001	Banana	plastid	54.21	49.15
Bra030545.1-P	Field mustard	cytosol	42.99	48.94
GSMUA_Achr7P10990_001	Banana	cytosol	60.75	44.52
TraesCS1D01G405200.1	Wheat	plastid	53.27	43.18
TraesCS3B01G272600.1	Wheat	plastid	54.21	42.34
TraesCS1B01G425500.1	Wheat	cytosol	53.27	41.91
Zm00001d009568_P001	Maize	cytosol	52.34	41.79
TraesCS3A01G246700.1	Wheat	plastid	53.27	41.3
TraesCS3D01G244800.1	Wheat	plastid	53.27	41.3
HORVU3Hr1G061080.1	Barley	plastid	53.27	41.01
Solyc10g008150.1.1	Tomato	cytosol	41.12	40.37
TraesCS1A01G396900.1	Wheat	cytosol	54.21	40.0
TraesCS1B01G425200.1	Wheat	plastid	53.27	39.58
Os01t0667900-01	Rice	cytosol	54.21	39.46
TraesCS6B01G132800.1	Wheat	cytosol	51.4	39.29
CDX94626	Canola	cytosol	46.73	39.06
Zm00001d039011_P001	Maize	cytosol	52.34	38.89
TraesCS1D01G404800.1	Wheat	cytosol	52.34	38.62
Solyc10g008930.1.1	Tomato	cytosol	45.79	38.58
CDY15662	Canola	cytosol	45.79	38.28
KRH20376	Soybean	plastid	48.6	38.24
HORVU1Hr1G092260.1	Barley	mitochondrion	54.21	38.16
AT1G28480.1	Thale cress	cytosol	48.6	37.96
TraesCS3A01G147400.1	Wheat	cytosol, plastid	49.53	37.59
VIT_12s0028g03010.t01	Wine grape	cytosol	49.53	37.59
TraesCS5A01G064100.1	Wheat	cytosol	47.66	36.96
OQU78423	Sorghum	cytosol, mitochondrion	51.4	36.91
KRH21345	Soybean	plastid	45.79	36.84
TraesCS4A01G254400.1	Wheat	plastid	47.66	36.69
Zm00001d011543_P001	Maize	extracellular	54.21	36.48
TraesCS2A01G232700.1	Wheat	cytosol	45.79	36.03
Bra030102.1-P	Field mustard	cytosol	45.79	36.03
Zm00001d043932_P001	Maize	cytosol	53.27	35.85
TraesCS4A01G254500.1	Wheat	plastid	48.6	35.37
KRH10949	Soybean	cytosol	43.93	35.34
CDY30815	Canola	cytosol	42.06	35.16
Bra032911.1-P	Field mustard	cytosol	44.86	35.04
CDY34097	Canola	cytosol	44.86	35.04
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	56.07	34.88
EES03406	Sorghum	cytosol, plastid	54.21	34.52
VIT_10s0003g00390.t01	Wine grape	cytosol	47.66	34.0
HORVU2Hr1G057870.1	Barley	cytosol	51.4	33.95
TraesCS1A01G397200.1	Wheat	plastid	52.34	33.94
GSMUA_Achr7P13560_001	Banana	cytosol	35.51	33.93
Solyc02g077580.1.1	Tomato	cytosol, plastid	43.93	32.87
PGSC0003DMT400056253	Potato	plastid	43.93	32.64
KRH26996	Soybean	mitochondrion	48.6	32.5
Solyc07g053550.1.1	Tomato	cytosol	43.93	31.76
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	36.45	31.71
HORVU1Hr1G087630.3	Barley	mitochondrion	52.34	31.64
PGSC0003DMT400024317	Potato	plastid	43.93	31.33
HORVU1Hr1G087600.1	Barley	plastid	55.14	31.22
KRH22331	Soybean	mitochondrion	49.53	30.46
KRH55866	Soybean	cytosol, plastid	48.6	30.23
KRH25663	Soybean	cytosol, plastid	48.6	30.06
HORVU3Hr1G065250.1	Barley	plastid	46.73	29.76
CDY18190	Canola	plastid	42.06	29.03
GSMUA_Achr10P...	Banana	mitochondrion	33.64	28.8
CDX89861	Canola	plastid	41.12	28.39
Bra015272.1-P	Field mustard	plastid	41.12	28.39
CDY32516	Canola	plastid	39.25	27.27
CDY10096	Canola	plastid	39.25	27.27
Bra032540.1-P	Field mustard	plastid	39.25	27.27
PGSC0003DMT400058776	Potato	plastid	44.86	26.67
VIT_00s0199g00290.t01	Wine grape	extracellular	25.23	22.69
AT1G03850.1	Thale cress	cytosol	33.64	22.64
CDY44992	Canola	cytosol	39.25	21.76

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G13880_001	EnsemblPlants:GSMUA_Achr1P13880_001
EnsemblPlants:GSMUA_Achr1T13880_001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0RZP6	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF111	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI00029692E0	SEG:seg	:	:	:	:

Description

Monothiol glutaredoxin-S5 [Source:GMGC_GENE;Acc:GSMUA_Achr1G13880_001]

Coordinates

chr1:+:10598802..10599125

Molecular Weight (calculated)

10936.6 Da

IEP (calculated)

5.596

GRAVY (calculated)

0.726

Length

107 amino acids

Sequence
(BLAST)

001: MVAENPVVVV AQRGCCICHA ARRLLLGLGV NPAVCEVGEE AAAAGEATAL VEAAAEIEAL GGHRRPPAML PVVFVGGRLL GGLDRLVAVH ITGELVPILK
101: EAGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.