Factsheet for Solyc10g008930.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058776	Potato	plastid	83.46	58.89
TraesCS5A01G096900.1	Wheat	cytosol	38.58	51.58
TraesCS7D01G442400.1	Wheat	cytosol	43.31	49.55
GSMUA_Achr6P27020_001	Banana	cytosol	36.22	48.94
Solyc10g008150.1.1	Tomato	cytosol	40.16	46.79
VIT_10s0003g00390.t01	Wine grape	cytosol	55.12	46.67
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	38.58	45.79
GSMUA_Achr3P15490_001	Banana	plastid	39.37	42.37
TraesCS1D01G405200.1	Wheat	plastid	42.52	40.91
Zm00001d009568_P001	Maize	cytosol	42.52	40.3
HORVU3Hr1G061080.1	Barley	plastid	44.09	40.29
GSMUA_Achr10P...	Banana	cytosol	38.58	40.16
TraesCS3B01G272600.1	Wheat	plastid	43.31	40.15
TraesCS3A01G246700.1	Wheat	plastid	43.31	39.86
TraesCS3D01G244800.1	Wheat	plastid	43.31	39.86
TraesCS1B01G425500.1	Wheat	cytosol	42.52	39.71
TraesCS6B01G132800.1	Wheat	cytosol	43.31	39.29
Solyc07g053550.1.1	Tomato	cytosol	45.67	39.19
TraesCS1D01G404800.1	Wheat	cytosol	44.09	38.62
TraesCS1A01G396900.1	Wheat	cytosol	44.09	38.62
TraesCS2B01G174000.1	Wheat	cytosol	33.86	38.39
HORVU2Hr1G026710.1	Barley	cytosol	33.86	38.39
OQU78423	Sorghum	cytosol, mitochondrion	44.88	38.26
TraesCS1B01G425200.1	Wheat	plastid	43.31	38.19
TraesCS3A01G147400.1	Wheat	cytosol, plastid	41.73	37.59
Zm00001d039011_P001	Maize	cytosol	42.52	37.5
TraesCS2A01G149100.1	Wheat	cytosol	33.07	37.5
TraesCS3B01G194500.1	Wheat	cytosol	33.07	37.5
Os01t0667900-01	Rice	cytosol	43.31	37.41
Solyc02g077580.1.1	Tomato	cytosol, plastid	41.73	37.06
TraesCS5A01G064100.1	Wheat	cytosol	40.16	36.96
TraesCS3D01G169500.1	Wheat	cytosol	32.28	36.61
HORVU1Hr1G092260.1	Barley	mitochondrion	43.31	36.18
Os01t0241400-01	Rice	cytosol, plastid	38.58	36.03
TraesCS2A01G232700.1	Wheat	cytosol	37.8	35.29
TraesCS4A01G254400.1	Wheat	plastid	38.58	35.25
TraesCS4A01G254500.1	Wheat	plastid	40.16	34.69
VIT_00s0199g00290.t01	Wine grape	extracellular	32.28	34.45
GSMUA_Achr7P10990_001	Banana	cytosol	39.37	34.25
Zm00001d011543_P001	Maize	extracellular	42.52	33.96
Zm00001d043932_P001	Maize	cytosol	42.52	33.96
HORVU2Hr1G057870.1	Barley	cytosol	42.52	33.33
TraesCS1A01G397200.1	Wheat	plastid	42.52	32.73
EES03406	Sorghum	cytosol, plastid	42.52	32.14
HORVU3Hr1G065250.1	Barley	plastid	41.73	31.55
HORVU1Hr1G087630.3	Barley	mitochondrion	41.73	29.94
HORVU1Hr1G087600.1	Barley	plastid	43.31	29.1
Solyc08g062970.1.1	Tomato	cytosol	31.5	28.78
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	38.58	28.49
HORVU3Hr1G032820.1	Barley	plastid	33.86	27.92
TraesCS2D01G153900.1	Wheat	cytosol	34.65	26.19
Solyc11g069940.1.1	Tomato	cytosol	28.35	25.35
TraesCS3A01G163500.1	Wheat	plastid	32.28	24.4

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:IPR002109	UniProt:K4CY69	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF69
SUPFAM:SSF52833	EnsemblPlantsGene:Solyc10g008930.1	EnsemblPlants:Solyc10g008930.1.1	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000276BBA1
SEG:seg	:	:	:	:	:

Description

Glutaredoxin-C9 [Source:Projected from Arabidopsis thaliana (AT1G28480) UniProtKB/Swiss-Prot;Acc:Q9SGP6]

Coordinates

chr10:+:2950728..2951111

Molecular Weight (calculated)

13528.4 Da

IEP (calculated)

4.838

GRAVY (calculated)

0.295

Length

127 amino acids

Sequence
(BLAST)

001: MKYVGEMRSR YKNSFITTSV AKSVSEHAII VVAIRGCCMC HVVKNLLLGL GVNPTIFEVN NEDEDDVKTE LSIITSGVGD GGGDGTTTEF PAVFVGGNLF
101: GGLERVISTH ISGELVPILK DVGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.