Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G096900.1 | Wheat | cytosol | 63.12 | 93.68 |
| TraesCS5A01G064100.1 | Wheat | cytosol | 85.82 | 87.68 |
| TraesCS1A01G396900.1 | Wheat | cytosol | 88.65 | 86.21 |
| TraesCS2A01G232700.1 | Wheat | cytosol | 81.56 | 84.56 |
| TraesCS6B01G132800.1 | Wheat | cytosol | 83.69 | 84.29 |
| TraesCS4A01G254400.1 | Wheat | plastid | 79.43 | 80.58 |
| TraesCS4A01G254500.1 | Wheat | plastid | 78.01 | 74.83 |
| TraesCS1A01G397200.1 | Wheat | plastid | 77.31 | 66.06 |
| HORVU2Hr1G057870.1 | Barley | cytosol | 75.89 | 66.05 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 40.43 | 60.64 |
| Zm00001d009568_P001 | Maize | cytosol | 57.45 | 60.45 |
| Zm00001d039011_P001 | Maize | cytosol | 61.7 | 60.42 |
| TraesCS3A01G246700.1 | Wheat | plastid | 58.16 | 59.42 |
| OQU78423 | Sorghum | cytosol, mitochondrion | 61.7 | 58.39 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 45.39 | 54.24 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 37.59 | 49.53 |
| KRH10949 | Soybean | cytosol | 45.39 | 48.12 |
| KRH20376 | Soybean | plastid | 45.39 | 47.06 |
| CDX94626 | Canola | cytosol | 42.55 | 46.88 |
| AT1G28480.1 | Thale cress | cytosol | 45.39 | 46.72 |
| CDY30815 | Canola | cytosol | 41.84 | 46.09 |
| Solyc10g008150.1.1 | Tomato | cytosol | 35.46 | 45.87 |
| TraesCS2A01G149100.1 | Wheat | cytosol | 36.17 | 45.54 |
| CDY15662 | Canola | cytosol | 41.13 | 45.31 |
| KRH21345 | Soybean | plastid | 42.55 | 45.11 |
| Bra030545.1-P | Field mustard | cytosol | 29.79 | 44.68 |
| VIT_12s0028g03010.t01 | Wine grape | cytosol | 44.68 | 44.68 |
| Bra030102.1-P | Field mustard | cytosol | 42.55 | 44.12 |
| CDY34097 | Canola | cytosol | 42.55 | 43.8 |
| Bra032911.1-P | Field mustard | cytosol | 42.55 | 43.8 |
| Solyc10g008930.1.1 | Tomato | cytosol | 37.59 | 41.73 |
| VIT_10s0003g00390.t01 | Wine grape | cytosol | 43.26 | 40.67 |
| KRH26996 | Soybean | mitochondrion | 44.68 | 39.38 |
| PGSC0003DMT400024317 | Potato | plastid | 41.84 | 39.33 |
| PGSC0003DMT400056253 | Potato | plastid | 39.01 | 38.19 |
| Solyc07g053550.1.1 | Tomato | cytosol | 39.72 | 37.84 |
| KRH22331 | Soybean | mitochondrion | 43.97 | 35.63 |
| KRH25663 | Soybean | cytosol, plastid | 43.26 | 35.26 |
| KRH55866 | Soybean | cytosol, plastid | 41.84 | 34.3 |
| VIT_00s0199g00290.t01 | Wine grape | extracellular | 28.37 | 33.61 |
| TraesCS3A01G105300.1 | Wheat | cytosol | 28.37 | 33.33 |
| Solyc02g077580.1.1 | Tomato | cytosol, plastid | 31.91 | 31.47 |
| PGSC0003DMT400058776 | Potato | plastid | 39.72 | 31.11 |
| TraesCS3A01G163500.1 | Wheat | plastid | 36.88 | 30.95 |
| CDY10096 | Canola | plastid | 31.21 | 28.57 |
| CDY32516 | Canola | plastid | 31.21 | 28.57 |
| Bra032540.1-P | Field mustard | plastid | 31.21 | 28.57 |
| CDY18190 | Canola | plastid | 31.21 | 28.39 |
| CDX89861 | Canola | plastid | 30.5 | 27.74 |
| Bra015272.1-P | Field mustard | plastid | 30.5 | 27.74 |
| AT1G03850.1 | Thale cress | cytosol | 27.66 | 24.53 |
| CDY44992 | Canola | cytosol | 31.21 | 22.8 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G147400.1 | EnsemblPlantsGene:TraesCS3A01G147400 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:GlrX-like_pln_2 |
| InterPro:Glutaredoxin | InterPro:IPR002109 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF199 | PFscan:PS51354 |
| SEG:seg | SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | MapMan:18.8.2 | : | : |
Description
No Description!
Coordinates
chr3A:-:128658771..128659215
Molecular Weight (calculated)
14555.7 Da
IEP (calculated)
4.884
GRAVY (calculated)
0.357
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQAIPYSAG RLPACLQQSE QAEAEGAAGQ EDMVARGDGG EVVRRAVAES LVLVVGRRGC YLSHVVKRLL QGLGVNPAMH EVADEAELAA AVAGNAGGEA
101: VVALLAVFVG GRNLGGLDRL MVVHISGELV PILKDAGALW L
101: VVALLAVFVG GRNLGGLDRL MVVHISGELV PILKDAGALW L
001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
Arabidopsis Description
GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.