Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10949 | Soybean | cytosol | 75.94 | 75.94 |
| KRH20376 | Soybean | plastid | 58.65 | 57.35 |
| TraesCS5A01G096900.1 | Wheat | cytosol | 39.85 | 55.79 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 39.1 | 55.32 |
| TraesCS7D01G442400.1 | Wheat | cytosol | 45.86 | 54.95 |
| CDY30815 | Canola | cytosol | 49.62 | 51.56 |
| AT1G28480.1 | Thale cress | cytosol | 52.63 | 51.09 |
| Bra030102.1-P | Field mustard | cytosol | 51.88 | 50.74 |
| TraesCS3D01G244800.1 | Wheat | plastid | 52.63 | 50.72 |
| TraesCS3A01G246700.1 | Wheat | plastid | 52.63 | 50.72 |
| CDX94626 | Canola | cytosol | 48.12 | 50.0 |
| TraesCS3B01G272600.1 | Wheat | plastid | 51.13 | 49.63 |
| CDY34097 | Canola | cytosol | 51.13 | 49.63 |
| Bra032911.1-P | Field mustard | cytosol | 51.13 | 49.63 |
| TraesCS1D01G405200.1 | Wheat | plastid | 48.87 | 49.24 |
| CDY15662 | Canola | cytosol | 47.37 | 49.22 |
| GSMUA_Achr10P... | Banana | cytosol | 45.11 | 49.18 |
| KRH26996 | Soybean | mitochondrion | 58.65 | 48.75 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 42.86 | 48.31 |
| TraesCS1B01G425500.1 | Wheat | cytosol | 48.87 | 47.79 |
| Zm00001d009568_P001 | Maize | cytosol | 48.12 | 47.76 |
| HORVU3Hr1G061080.1 | Barley | plastid | 49.62 | 47.48 |
| Os01t0667900-01 | Rice | cytosol | 51.13 | 46.26 |
| TraesCS1B01G425200.1 | Wheat | plastid | 49.62 | 45.83 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 36.84 | 45.79 |
| TraesCS1D01G404800.1 | Wheat | cytosol | 49.62 | 45.52 |
| TraesCS1A01G396900.1 | Wheat | cytosol | 49.62 | 45.52 |
| Zm00001d039011_P001 | Maize | cytosol | 48.12 | 44.44 |
| TraesCS3B01G194500.1 | Wheat | cytosol | 36.84 | 43.75 |
| KRH22331 | Soybean | mitochondrion | 56.39 | 43.1 |
| TraesCS3D01G169500.1 | Wheat | cytosol | 36.09 | 42.86 |
| TraesCS5A01G064100.1 | Wheat | cytosol | 44.36 | 42.75 |
| TraesCS3A01G147400.1 | Wheat | cytosol, plastid | 45.11 | 42.55 |
| TraesCS6B01G132800.1 | Wheat | cytosol | 44.36 | 42.14 |
| HORVU1Hr1G092260.1 | Barley | mitochondrion | 48.12 | 42.11 |
| TraesCS2A01G232700.1 | Wheat | cytosol | 42.86 | 41.91 |
| GSMUA_Achr7P10990_001 | Banana | cytosol | 45.86 | 41.78 |
| OQU78423 | Sorghum | cytosol, mitochondrion | 46.62 | 41.61 |
| Zm00001d011543_P001 | Maize | extracellular | 49.62 | 41.51 |
| Zm00001d043932_P001 | Maize | cytosol | 49.62 | 41.51 |
| TraesCS4A01G254400.1 | Wheat | plastid | 42.86 | 41.01 |
| HORVU2Hr1G026710.1 | Barley | cytosol | 33.83 | 40.18 |
| KRH25663 | Soybean | cytosol, plastid | 51.88 | 39.88 |
| KRH55866 | Soybean | cytosol, plastid | 51.13 | 39.53 |
| HORVU2Hr1G057870.1 | Barley | cytosol | 47.37 | 38.89 |
| TraesCS4A01G254500.1 | Wheat | plastid | 42.86 | 38.78 |
| EES03406 | Sorghum | cytosol, plastid | 48.87 | 38.69 |
| Os01t0241400-01 | Rice | cytosol, plastid | 39.1 | 38.24 |
| TraesCS1A01G397200.1 | Wheat | plastid | 46.62 | 37.58 |
| TraesCS2B01G174000.1 | Wheat | cytosol | 31.58 | 37.5 |
| GSMUA_Achr2P15240_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plastid | 47.37 | 36.63 |
| TraesCS2A01G149100.1 | Wheat | cytosol | 30.08 | 35.71 |
| HORVU1Hr1G087630.3 | Barley | mitochondrion | 46.62 | 35.03 |
| HORVU1Hr1G087600.1 | Barley | plastid | 49.62 | 34.92 |
| HORVU3Hr1G065250.1 | Barley | plastid | 43.61 | 34.52 |
| HORVU3Hr1G032820.1 | Barley | plastid | 38.35 | 33.12 |
| KRH15571 | Soybean | cytosol | 33.08 | 31.21 |
| KRH61512 | Soybean | cytosol | 31.58 | 30.88 |
| KRH05438 | Soybean | cytosol | 33.08 | 29.93 |
| TraesCS3A01G163500.1 | Wheat | plastid | 35.34 | 27.98 |
| KRH52204 | Soybean | cytosol | 29.32 | 27.86 |
| TraesCS2D01G153900.1 | Wheat | cytosol | 33.08 | 26.19 |
Protein Annotations
| EntrezGene:100791149 | MapMan:18.8.2 | Gene3D:3.40.30.10 | EMBL:ACUP02008354 | EnsemblPlantsGene:GLYMA_13G234500 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 |
| GO:GO:0055114 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | UniProt:I1M1Y4 | InterPro:IPR002109 | EnsemblPlants:KRH21345 |
| ProteinID:KRH21345 | ProteinID:KRH21345.1 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF69 |
| SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001CAA111 | : | : |
Description
hypothetical protein
Coordinates
chr13:+:34514243..34515302
Molecular Weight (calculated)
14093.3 Da
IEP (calculated)
7.641
GRAVY (calculated)
0.221
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQAISHRSF IPIGARGMPH AGGIKESNGT YPSKAATMVS ENAVVIIGKR GCCMCHVVKR LLQGLGVNPP VYEVDEDHEA AVALHLSPQG AETVQFPAVF
101: LAGKLFGGLE RVMATHISGE LVPILKDAGA LWL
101: LAGKLFGGLE RVMATHISGE LVPILKDAGA LWL
001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
Arabidopsis Description
GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.