Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34097 | Canola | cytosol | 92.97 | 86.86 |
| AT1G28480.1 | Thale cress | cytosol | 75.78 | 70.8 |
| CDX94626 | Canola | cytosol | 67.19 | 67.19 |
| CDY15662 | Canola | cytosol | 59.38 | 59.38 |
| TraesCS7D01G442400.1 | Wheat | cytosol | 47.66 | 54.95 |
| TraesCS5A01G096900.1 | Wheat | cytosol | 40.62 | 54.74 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 39.06 | 53.19 |
| KRH21345 | Soybean | plastid | 51.56 | 49.62 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 43.75 | 47.46 |
| KRH10949 | Soybean | cytosol | 49.22 | 47.37 |
| TraesCS1B01G425500.1 | Wheat | cytosol | 50.0 | 47.06 |
| TraesCS1D01G405200.1 | Wheat | plastid | 47.66 | 46.21 |
| KRH20376 | Soybean | plastid | 48.44 | 45.59 |
| TraesCS1D01G404800.1 | Wheat | cytosol | 50.0 | 44.14 |
| TraesCS1A01G396900.1 | Wheat | cytosol | 50.0 | 44.14 |
| TraesCS1B01G425200.1 | Wheat | plastid | 49.22 | 43.75 |
| TraesCS6B01G132800.1 | Wheat | cytosol | 47.66 | 43.57 |
| Zm00001d009568_P001 | Maize | cytosol | 45.31 | 43.28 |
| GSMUA_Achr10P... | Banana | cytosol | 40.62 | 42.62 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 35.16 | 42.06 |
| TraesCS3A01G147400.1 | Wheat | cytosol, plastid | 46.09 | 41.84 |
| OQU78423 | Sorghum | cytosol, mitochondrion | 48.44 | 41.61 |
| TraesCS3A01G246700.1 | Wheat | plastid | 44.53 | 41.3 |
| TraesCS3D01G244800.1 | Wheat | plastid | 44.53 | 41.3 |
| Zm00001d039011_P001 | Maize | cytosol | 46.09 | 40.97 |
| TraesCS4A01G254400.1 | Wheat | plastid | 43.75 | 40.29 |
| Os01t0667900-01 | Rice | cytosol | 46.09 | 40.14 |
| TraesCS4A01G254500.1 | Wheat | plastid | 46.09 | 40.14 |
| HORVU1Hr1G092260.1 | Barley | mitochondrion | 47.66 | 40.13 |
| TraesCS2A01G232700.1 | Wheat | cytosol | 42.19 | 39.71 |
| TraesCS3B01G272600.1 | Wheat | plastid | 42.19 | 39.42 |
| TraesCS3B01G194500.1 | Wheat | cytosol | 34.38 | 39.29 |
| GSMUA_Achr7P10990_001 | Banana | cytosol | 44.53 | 39.04 |
| HORVU3Hr1G061080.1 | Barley | plastid | 42.19 | 38.85 |
| TraesCS5A01G064100.1 | Wheat | cytosol | 41.41 | 38.41 |
| TraesCS3D01G169500.1 | Wheat | cytosol | 33.59 | 38.39 |
| Os01t0241400-01 | Rice | cytosol, plastid | 40.62 | 38.24 |
| HORVU2Hr1G057870.1 | Barley | cytosol | 46.88 | 37.04 |
| Zm00001d043932_P001 | Maize | cytosol | 45.31 | 36.48 |
| TraesCS1A01G397200.1 | Wheat | plastid | 46.88 | 36.36 |
| HORVU2Hr1G026710.1 | Barley | cytosol | 31.25 | 35.71 |
| TraesCS2A01G149100.1 | Wheat | cytosol | 31.25 | 35.71 |
| Zm00001d011543_P001 | Maize | extracellular | 43.75 | 35.22 |
| TraesCS2B01G174000.1 | Wheat | cytosol | 30.47 | 34.82 |
| HORVU3Hr1G065250.1 | Barley | plastid | 45.31 | 34.52 |
| HORVU1Hr1G087630.3 | Barley | mitochondrion | 47.66 | 34.46 |
| GSMUA_Achr2P15240_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plastid | 46.09 | 34.3 |
| CDY28280 | Canola | cytosol | 38.28 | 34.03 |
| CDY10096 | Canola | plastid | 40.62 | 33.77 |
| CDY32516 | Canola | plastid | 40.62 | 33.77 |
| CDY18190 | Canola | plastid | 40.62 | 33.55 |
| EES03406 | Sorghum | cytosol, plastid | 43.75 | 33.33 |
| HORVU1Hr1G087600.1 | Barley | plastid | 48.44 | 32.8 |
| CDX75319 | Canola | cytosol | 36.72 | 32.64 |
| CDX68934 | Canola | cytosol | 36.72 | 32.64 |
| CDX89861 | Canola | plastid | 39.06 | 32.26 |
| CDY45025 | Canola | cytosol | 35.16 | 31.25 |
| CDY13515 | Canola | cytosol | 34.38 | 31.21 |
| CDX72386 | Canola | cytosol | 34.38 | 31.21 |
| CDX70434 | Canola | cytosol, plastid | 33.59 | 30.71 |
| CDX78456 | Canola | plastid | 32.81 | 30.0 |
| CDX97156 | Canola | cytosol, plastid | 32.03 | 29.29 |
| CDX69718 | Canola | cytosol, plastid | 32.03 | 29.29 |
| HORVU3Hr1G032820.1 | Barley | plastid | 33.59 | 27.92 |
| CDY44992 | Canola | cytosol | 40.62 | 26.94 |
| TraesCS3A01G163500.1 | Wheat | plastid | 32.81 | 25.0 |
| TraesCS2D01G153900.1 | Wheat | cytosol | 30.47 | 23.21 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078GWG8 | UniProt:A0A078GWG8 | EnsemblPlants:CDY30815 | ProteinID:CDY30815 |
| ProteinID:CDY30815.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00046263001 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF111 | SUPFAM:SSF52833 |
| TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE021B | : | : | : |
Description
BnaC05g21910DBnaC05g21910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWG8]
Coordinates
chrLK032261:-:231246..231659
Molecular Weight (calculated)
13934.3 Da
IEP (calculated)
7.388
GRAVY (calculated)
0.104
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGTISCTRH YNMIPAAESP RPLPLKTEKT GENVRTLVEE NALIVIGRRG CCMCHVVKSL LLGLGVNPAE EEVMSELERI GVEGGRERVK LPAVYIGGRL
101: FGGLDRVMAT HISGELVPIL KDVGALWL
101: FGGLDRVMAT HISGELVPIL KDVGALWL
001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
Arabidopsis Description
GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.