Factsheet for HORVU3Hr1G061080.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G032230.4
HORVU1Hr1G068220.1
HORVU2Hr1G016580.5
HORVU3Hr1G019230.6
HORVU3Hr1G042790.4
HORVU3Hr1G042830.1
HORVU3Hr1G079010.5
HORVU4Hr1G019530.1
HORVU4Hr1G052330.3
HORVU5Hr1G032550.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT1G03850.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088
AT1G28480.1	HORVU3Hr1G019230.6	AT1G64280.1	17397508
AT1G28480.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G28480.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944
AT1G28480.1	HORVU0Hr1G032230.4	AT5G06960.1	21798944
AT1G28480.1	HORVU1Hr1G068220.1	AT5G06960.1	21798944
AT1G28480.1	HORVU2Hr1G016580.5	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042790.4	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042830.1	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G079010.5	AT5G06960.1	21798944
AT1G28480.1	HORVU4Hr1G052330.3	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G272600.1	Wheat	plastid	84.89	86.13
TraesCS3A01G246700.1	Wheat	plastid	84.89	85.51
TraesCS3D01G244800.1	Wheat	plastid	83.45	84.06
Os01t0667900-01	Rice	cytosol	72.66	68.71
Zm00001d011543_P001	Maize	extracellular	73.38	64.15
Zm00001d043932_P001	Maize	cytosol	71.22	62.26
GSMUA_Achr6P27020_001	Banana	cytosol	41.73	61.7
EES03406	Sorghum	cytosol, plastid	73.38	60.71
GSMUA_Achr3P15490_001	Banana	plastid	48.92	57.63
HORVU1Hr1G092260.1	Barley	mitochondrion	60.43	55.26
KRH10949	Soybean	cytosol	51.8	54.14
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	41.01	53.27
KRH20376	Soybean	plastid	51.8	52.94
HORVU2Hr1G057870.1	Barley	cytosol	59.71	51.23
Bra030545.1-P	Field mustard	cytosol	33.81	50.0
KRH21345	Soybean	plastid	47.48	49.62
VIT_10s0003g00390.t01	Wine grape	cytosol	52.52	48.67
HORVU1Hr1G087600.1	Barley	plastid	64.75	47.62
HORVU2Hr1G026710.1	Barley	cytosol	38.13	47.32
HORVU3Hr1G065250.1	Barley	plastid	56.83	47.02
VIT_12s0028g03010.t01	Wine grape	cytosol	47.48	46.81
HORVU1Hr1G087630.3	Barley	mitochondrion	58.99	46.33
CDY15662	Canola	cytosol	42.45	46.09
AT1G28480.1	Thale cress	cytosol	44.6	45.26
Solyc10g008150.1.1	Tomato	cytosol	35.25	44.95
Bra030102.1-P	Field mustard	cytosol	43.88	44.85
CDX94626	Canola	cytosol	41.01	44.53
Solyc10g008930.1.1	Tomato	cytosol	40.29	44.09
KRH26996	Soybean	mitochondrion	50.36	43.75
CDY30815	Canola	cytosol	38.85	42.19
CDY34097	Canola	cytosol	40.29	40.88
Bra032911.1-P	Field mustard	cytosol	40.29	40.88
KRH25663	Soybean	cytosol, plastid	49.64	39.88
Solyc07g053550.1.1	Tomato	cytosol	42.45	39.86
KRH22331	Soybean	mitochondrion	49.64	39.66
HORVU3Hr1G032820.1	Barley	plastid	43.88	39.61
PGSC0003DMT400056253	Potato	plastid	41.01	39.58
KRH55866	Soybean	cytosol, plastid	48.92	39.53
PGSC0003DMT400024317	Potato	plastid	41.73	38.67
Solyc02g077580.1.1	Tomato	cytosol, plastid	37.41	36.36
CDY18190	Canola	plastid	38.85	34.84
CDX89861	Canola	plastid	38.85	34.84
Bra015272.1-P	Field mustard	plastid	38.13	34.19
PGSC0003DMT400058776	Potato	plastid	42.45	32.78
VIT_00s0199g00290.t01	Wine grape	extracellular	28.06	32.77
Bra032540.1-P	Field mustard	plastid	35.97	32.47
CDY10096	Canola	plastid	35.97	32.47
CDY32516	Canola	plastid	35.97	32.47
AT1G03850.1	Thale cress	cytosol	33.09	28.93
CDY44992	Canola	cytosol	35.97	25.91

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EMBL:AK365807	UniProt:F2DPI9	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU3Hr1G061080	EnsemblPlants:HORVU3Hr1G061080.1	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF199	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI0002006B2E	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DPI9]

Coordinates

chrchr3H:+:465583482..465586647

Molecular Weight (calculated)

14304.4 Da

IEP (calculated)

6.783

GRAVY (calculated)

0.274

Length

139 amino acids

Sequence
(BLAST)

001: MYQAIPYSSS RPWTTRPSPP SAMAEAAVKT ETAEAAASRE DAAGVERAVS ESPVVVVGRR ACCLTHVVKR LLQGLGVNPA VHEVADEAAL AGVVPDGGEA
101: ALPAVFVGGK LLGGLDRLMA VHISGELVPI LKKAGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.