Factsheet for HORVU2Hr1G026710.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G032230.4
HORVU1Hr1G068220.1
HORVU2Hr1G016580.5
HORVU3Hr1G019230.6
HORVU3Hr1G042790.4
HORVU3Hr1G042830.1
HORVU3Hr1G079010.5
HORVU4Hr1G019530.1
HORVU4Hr1G052330.3
HORVU5Hr1G032550.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT1G03850.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088
AT1G28480.1	HORVU3Hr1G019230.6	AT1G64280.1	17397508
AT1G28480.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G28480.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944
AT1G28480.1	HORVU0Hr1G032230.4	AT5G06960.1	21798944
AT1G28480.1	HORVU1Hr1G068220.1	AT5G06960.1	21798944
AT1G28480.1	HORVU2Hr1G016580.5	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042790.4	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042830.1	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G079010.5	AT5G06960.1	21798944
AT1G28480.1	HORVU4Hr1G052330.3	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G174000.1	Wheat	cytosol	84.82	84.82
TraesCS2A01G149100.1	Wheat	cytosol	78.57	78.57
TraesCS2D01G153900.1	Wheat	cytosol	80.36	53.57
Os01t0241400-01	Rice	cytosol, plastid	60.71	50.0
HORVU3Hr1G032820.1	Barley	plastid	68.75	50.0
GSMUA_Achr10P...	Banana	cytosol	53.57	49.18
Bra030545.1-P	Field mustard	cytosol	39.29	46.81
GSMUA_Achr7P10990_001	Banana	cytosol	51.79	39.73
HORVU3Hr1G061080.1	Barley	plastid	47.32	38.13
KRH20376	Soybean	plastid	44.64	36.76
HORVU1Hr1G092260.1	Barley	mitochondrion	48.21	35.53
CDY15662	Canola	cytosol	40.18	35.16
CDX94626	Canola	cytosol	39.29	34.38
VIT_12s0028g03010.t01	Wine grape	cytosol	42.86	34.04
Solyc10g008150.1.1	Tomato	cytosol	33.04	33.95
Solyc10g008930.1.1	Tomato	cytosol	38.39	33.86
KRH21345	Soybean	plastid	40.18	33.83
Bra030102.1-P	Field mustard	cytosol	40.18	33.09
KRH10949	Soybean	cytosol	39.29	33.08
CDY34097	Canola	cytosol	40.18	32.85
AT1G28480.1	Thale cress	cytosol	40.18	32.85
Bra032911.1-P	Field mustard	cytosol	40.18	32.85
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	49.11	31.98
VIT_10s0003g00390.t01	Wine grape	cytosol	41.96	31.33
KRH26996	Soybean	mitochondrion	44.64	31.25
CDY30815	Canola	cytosol	35.71	31.25
HORVU2Hr1G057870.1	Barley	cytosol	44.64	30.86
HORVU1Hr1G087630.3	Barley	mitochondrion	48.21	30.51
HORVU1Hr1G087600.1	Barley	plastid	49.11	29.1
HORVU3Hr1G065250.1	Barley	plastid	42.86	28.57
Solyc07g053550.1.1	Tomato	cytosol	36.61	27.7
KRH22331	Soybean	mitochondrion	42.86	27.59
PGSC0003DMT400024317	Potato	plastid	36.61	27.33
CDY18190	Canola	plastid	37.5	27.1
Bra015272.1-P	Field mustard	plastid	37.5	27.1
CDX89861	Canola	plastid	37.5	27.1
CDY32516	Canola	plastid	36.61	26.62
Bra032540.1-P	Field mustard	plastid	36.61	26.62
PGSC0003DMT400056253	Potato	plastid	33.93	26.39
CDY10096	Canola	plastid	35.71	25.97
Solyc02g077580.1.1	Tomato	cytosol, plastid	33.04	25.87
KRH25663	Soybean	cytosol, plastid	39.29	25.43
KRH55866	Soybean	cytosol, plastid	37.5	24.42
VIT_00s0199g00290.t01	Wine grape	extracellular	25.0	23.53
PGSC0003DMT400058776	Potato	plastid	36.61	22.78
AT1G03850.1	Thale cress	cytosol	29.46	20.75
CDY44992	Canola	cytosol	35.71	20.73

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU2Hr1G026710
EnsemblPlants:HORVU2Hr1G026710.1	InterPro:IPR002109	UniProt:M0VFP0	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF120
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002953ACD	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:85563762..85564100

Molecular Weight (calculated)

12184.1 Da

IEP (calculated)

7.421

GRAVY (calculated)

0.404

Length

112 amino acids

Sequence
(BLAST)

001: MASSTNDVRR TVRERPVVVV GRPGCCLALV AQHLLLRQGV NPAVLEVSYD ADPAALIFAL RSKDDNTKLI TDVAFPLVFI GGRLLGGLDR LIEMHIAEEL
101: VPLLRQAGAL WV

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.