CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY05010
CDY14061
CDY24170
CDY25575
CDY34413
CDY36943

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G28480.1	CDY25575	AT1G64280.1	17397508
AT1G28480.1	CDY34413	AT1G64280.1	17397508
AT1G28480.1	CDY24170	AT3G47620.1	21798944
AT1G28480.1	CDY36943	AT3G47620.1	21798944
AT1G28480.1	CDY05010	AT5G06960.1	21798944
AT1G28480.1	CDY14061	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030102.1-P	Field mustard	cytosol	92.19	86.76
CDX94626	Canola	cytosol	70.31	70.31
AT1G28480.1	Thale cress	cytosol	64.06	59.85
CDY30815	Canola	cytosol	59.38	59.38
CDY34097	Canola	cytosol	62.5	58.39
TraesCS7D01G442400.1	Wheat	cytosol	46.88	54.05
TraesCS5A01G096900.1	Wheat	cytosol	39.06	52.63
GSMUA_Achr6P27020_001	Banana	cytosol	38.28	52.13
GSMUA_Achr3P15490_001	Banana	plastid	45.31	49.15
KRH21345	Soybean	plastid	49.22	47.37
TraesCS1D01G405200.1	Wheat	plastid	48.44	46.97
TraesCS1B01G425500.1	Wheat	cytosol	49.22	46.32
KRH10949	Soybean	cytosol	47.66	45.86
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	38.28	45.79
TraesCS1B01G425200.1	Wheat	plastid	49.22	43.75
TraesCS6B01G132800.1	Wheat	cytosol	47.66	43.57
TraesCS3A01G246700.1	Wheat	plastid	46.88	43.48
TraesCS3D01G244800.1	Wheat	plastid	46.88	43.48
TraesCS1D01G404800.1	Wheat	cytosol	49.22	43.45
TraesCS1A01G396900.1	Wheat	cytosol	49.22	43.45
GSMUA_Achr10P...	Banana	cytosol	41.41	43.44
Zm00001d009568_P001	Maize	cytosol	45.31	43.28
Os01t0667900-01	Rice	cytosol	49.22	42.86
KRH20376	Soybean	plastid	45.31	42.65
HORVU3Hr1G061080.1	Barley	plastid	46.09	42.45
Zm00001d039011_P001	Maize	cytosol	46.88	41.67
OQU78423	Sorghum	cytosol, mitochondrion	48.44	41.61
TraesCS3B01G272600.1	Wheat	plastid	44.53	41.61
TraesCS3A01G147400.1	Wheat	cytosol, plastid	45.31	41.13
TraesCS3B01G194500.1	Wheat	cytosol	35.94	41.07
TraesCS2A01G232700.1	Wheat	cytosol	42.97	40.44
TraesCS4A01G254400.1	Wheat	plastid	43.75	40.29
TraesCS3D01G169500.1	Wheat	cytosol	35.16	40.18
HORVU2Hr1G026710.1	Barley	cytosol	35.16	40.18
Zm00001d043932_P001	Maize	cytosol	49.22	39.62
HORVU1Hr1G092260.1	Barley	mitochondrion	46.88	39.47
TraesCS2B01G174000.1	Wheat	cytosol	34.38	39.29
TraesCS2A01G149100.1	Wheat	cytosol	34.38	39.29
TraesCS5A01G064100.1	Wheat	cytosol	42.19	39.13
Os01t0241400-01	Rice	cytosol, plastid	41.41	38.97
TraesCS4A01G254500.1	Wheat	plastid	44.53	38.78
EES03406	Sorghum	cytosol, plastid	50.78	38.69
Zm00001d011543_P001	Maize	extracellular	47.66	38.36
GSMUA_Achr7P10990_001	Banana	cytosol	43.75	38.36
HORVU2Hr1G057870.1	Barley	cytosol	46.88	37.04
TraesCS1A01G397200.1	Wheat	plastid	47.66	36.97
CDX89861	Canola	plastid	42.19	34.84
HORVU1Hr1G087630.3	Barley	mitochondrion	47.66	34.46
CDY18190	Canola	plastid	41.41	34.19
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	45.31	33.72
HORVU3Hr1G065250.1	Barley	plastid	43.75	33.33
HORVU1Hr1G087600.1	Barley	plastid	48.44	32.8
CDX68934	Canola	cytosol	35.94	31.94
CDX75319	Canola	cytosol	35.94	31.94
CDY32516	Canola	plastid	38.28	31.82
CDY10096	Canola	plastid	38.28	31.82
CDY28280	Canola	cytosol	33.59	29.86
CDX72386	Canola	cytosol	32.81	29.79
HORVU3Hr1G032820.1	Barley	plastid	35.16	29.22
CDY13515	Canola	cytosol	32.03	29.08
CDX97156	Canola	cytosol, plastid	31.25	28.57
CDX78456	Canola	plastid	31.25	28.57
CDX70434	Canola	cytosol, plastid	31.25	28.57
CDX69718	Canola	cytosol, plastid	31.25	28.57
CDY45025	Canola	cytosol	32.03	28.47
TraesCS3A01G163500.1	Wheat	plastid	35.94	27.38
TraesCS2D01G153900.1	Wheat	cytosol	34.38	26.19
CDY44992	Canola	cytosol	38.28	25.39

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:A0A078FS36	UniProt:A0A078FS36	EnsemblPlants:CDY15662	ProteinID:CDY15662
ProteinID:CDY15662.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00089869001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF69	SUPFAM:SSF52833
TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE088F	:	:	:

Description

BnaA07g08330DBnaA07g08330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS36]

Coordinates

chrLK032056:+:285217..285669

Molecular Weight (calculated)

13946.5 Da

IEP (calculated)

7.943

GRAVY (calculated)

0.279

Length

128 amino acids

Sequence
(BLAST)

001: MQGTISCSRH YPMIPAAESL RPLPLRTQGN DESVRMLVEE NAVMVIGRKG CCMCIVVKRL LFGLGVNPAV LEIDEKREKI GAKDGRETVM LPAVYIGGVL
101: FGGLDRVMAT HISGELVPIL KEVGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.