Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G246700.1 | Wheat | plastid | 97.83 | 97.83 |
| TraesCS3B01G272600.1 | Wheat | plastid | 94.93 | 95.62 |
| HORVU3Hr1G061080.1 | Barley | plastid | 84.06 | 83.45 |
| TraesCS7D01G442400.1 | Wheat | cytosol | 58.7 | 72.97 |
| Os01t0667900-01 | Rice | cytosol | 77.54 | 72.79 |
| TraesCS1D01G405200.1 | Wheat | plastid | 63.04 | 65.91 |
| Zm00001d011543_P001 | Maize | extracellular | 74.64 | 64.78 |
| TraesCS1D01G404800.1 | Wheat | cytosol | 66.67 | 63.45 |
| EES03406 | Sorghum | cytosol, plastid | 76.09 | 62.5 |
| Zm00001d043932_P001 | Maize | cytosol | 71.74 | 62.26 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 52.9 | 61.86 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 42.03 | 61.7 |
| KRH20376 | Soybean | plastid | 52.9 | 53.68 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 41.3 | 53.27 |
| KRH21345 | Soybean | plastid | 50.72 | 52.63 |
| KRH10949 | Soybean | cytosol | 50.0 | 51.88 |
| Bra030545.1-P | Field mustard | cytosol | 34.06 | 50.0 |
| TraesCS3D01G169500.1 | Wheat | cytosol | 39.13 | 48.21 |
| VIT_12s0028g03010.t01 | Wine grape | cytosol | 48.55 | 47.52 |
| CDY15662 | Canola | cytosol | 43.48 | 46.88 |
| AT1G28480.1 | Thale cress | cytosol | 46.38 | 46.72 |
| CDX94626 | Canola | cytosol | 42.75 | 46.09 |
| Solyc10g008150.1.1 | Tomato | cytosol | 36.23 | 45.87 |
| Bra030102.1-P | Field mustard | cytosol | 44.93 | 45.59 |
| VIT_10s0003g00390.t01 | Wine grape | cytosol | 49.28 | 45.33 |
| CDY30815 | Canola | cytosol | 41.3 | 44.53 |
| Solyc10g008930.1.1 | Tomato | cytosol | 39.86 | 43.31 |
| CDY34097 | Canola | cytosol | 42.75 | 43.07 |
| Bra032911.1-P | Field mustard | cytosol | 42.75 | 43.07 |
| KRH26996 | Soybean | mitochondrion | 49.28 | 42.5 |
| KRH25663 | Soybean | cytosol, plastid | 49.28 | 39.31 |
| Solyc07g053550.1.1 | Tomato | cytosol | 42.03 | 39.19 |
| KRH22331 | Soybean | mitochondrion | 49.28 | 39.08 |
| PGSC0003DMT400056253 | Potato | plastid | 40.58 | 38.89 |
| KRH55866 | Soybean | cytosol, plastid | 47.83 | 38.37 |
| PGSC0003DMT400024317 | Potato | plastid | 41.3 | 38.0 |
| TraesCS3D01G107400.1 | Wheat | cytosol | 31.88 | 36.67 |
| Solyc02g077580.1.1 | Tomato | cytosol, plastid | 36.23 | 34.97 |
| CDY18190 | Canola | plastid | 39.13 | 34.84 |
| Bra015272.1-P | Field mustard | plastid | 38.41 | 34.19 |
| CDX89861 | Canola | plastid | 37.68 | 33.55 |
| TraesCS2D01G153900.1 | Wheat | cytosol | 40.58 | 33.33 |
| CDY10096 | Canola | plastid | 36.96 | 33.12 |
| Bra032540.1-P | Field mustard | plastid | 36.96 | 33.12 |
| CDY32516 | Canola | plastid | 36.96 | 33.12 |
| PGSC0003DMT400058776 | Potato | plastid | 42.03 | 32.22 |
| VIT_00s0199g00290.t01 | Wine grape | extracellular | 27.54 | 31.93 |
| AT1G03850.1 | Thale cress | cytosol | 34.06 | 29.56 |
| CDY44992 | Canola | cytosol | 36.96 | 26.42 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G244800.1 | EnsemblPlantsGene:TraesCS3D01G244800 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:GlrX-like_pln_2 |
| InterPro:Glutaredoxin | InterPro:IPR002109 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF199 | PFAM:PF00462 |
| PFscan:PS51354 | SEG:seg | SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | MapMan:18.8.2 | : |
Description
No Description!
Coordinates
chr3D:+:340069670..340070086
Molecular Weight (calculated)
14129.1 Da
IEP (calculated)
6.783
GRAVY (calculated)
0.341
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQAIPYSST RPWARPSPAA EAAVAVKTET AEASASREDA AGVERAVSES PVVVVGRRAC CLTHVVKRLL QGLGVNPAVH EVADEAALAG VVPDGGEAAA
101: LPAVFVGGKL LGGLDRLMAV HISGELVPIL KKAGALWL
101: LPAVFVGGKL LGGLDRLMAV HISGELVPIL KKAGALWL
001: MQKAIRPYES PWTKTVPGNS IFLLKNEDKP SSSSSSLSWL TSGSPKPTSI SNKRSSNLVV MENAVVVFAR RGCCLGHVAK RLLLTHGVNP VVVEIGEEDN
101: NNYDNIVSDK EKLPMMYIGG KLFGGLENLM AAHINGDLVP TLRQAGALWL
101: NNYDNIVSDK EKLPMMYIGG KLFGGLENLM AAHINGDLVP TLRQAGALWL
Arabidopsis Description
Glutaredoxin family protein [Source:TAIR;Acc:AT1G03850]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.