Factsheet for PGSC0003DMT400058776

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g008930.1.1	Tomato	cytosol	58.89	83.46
VIT_10s0003g00390.t01	Wine grape	cytosol	46.67	56.0
TraesCS5A01G096900.1	Wheat	cytosol	27.22	51.58
TraesCS7D01G442400.1	Wheat	cytosol	30.56	49.55
GSMUA_Achr6P27020_001	Banana	cytosol	25.56	48.94
GSMUA_Achr3P15490_001	Banana	plastid	30.0	45.76
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	26.67	44.86
PGSC0003DMT400056253	Potato	plastid	35.56	44.44
PGSC0003DMT400024317	Potato	plastid	36.11	43.33
Zm00001d009568_P001	Maize	cytosol	32.22	43.28
HORVU3Hr1G061080.1	Barley	plastid	32.78	42.45
TraesCS1D01G405200.1	Wheat	plastid	31.11	42.42
TraesCS1D01G404800.1	Wheat	cytosol	33.89	42.07
TraesCS3D01G244800.1	Wheat	plastid	32.22	42.03
VIT_00s0199g00290.t01	Wine grape	extracellular	27.78	42.02
TraesCS1B01G425500.1	Wheat	cytosol	31.67	41.91
GSMUA_Achr10P...	Banana	cytosol	28.33	41.8
TraesCS1B01G425200.1	Wheat	plastid	33.33	41.67
TraesCS1A01G396900.1	Wheat	cytosol	33.33	41.38
TraesCS3A01G246700.1	Wheat	plastid	31.67	41.3
TraesCS3B01G272600.1	Wheat	plastid	31.11	40.88
Os01t0667900-01	Rice	cytosol	33.33	40.82
TraesCS6B01G132800.1	Wheat	cytosol	31.11	40.0
TraesCS3A01G147400.1	Wheat	cytosol, plastid	31.11	39.72
OQU78423	Sorghum	cytosol, mitochondrion	32.78	39.6
Zm00001d039011_P001	Maize	cytosol	31.67	39.58
GSMUA_Achr7P10990_001	Banana	cytosol	31.67	39.04
TraesCS5A01G064100.1	Wheat	cytosol	29.44	38.41
TraesCS3B01G194500.1	Wheat	cytosol	23.89	38.39
TraesCS2A01G232700.1	Wheat	cytosol	28.89	38.24
TraesCS4A01G254500.1	Wheat	plastid	31.11	38.1
TraesCS2A01G149100.1	Wheat	cytosol	23.33	37.5
TraesCS2B01G174000.1	Wheat	cytosol	23.33	37.5
TraesCS3D01G169500.1	Wheat	cytosol	23.33	37.5
TraesCS4A01G254400.1	Wheat	plastid	28.89	37.41
HORVU1Hr1G092260.1	Barley	mitochondrion	31.11	36.84
Os01t0241400-01	Rice	cytosol, plastid	27.78	36.76
HORVU2Hr1G026710.1	Barley	cytosol	22.78	36.61
Zm00001d043932_P001	Maize	cytosol	32.22	36.48
HORVU3Hr1G065250.1	Barley	plastid	32.78	35.12
Zm00001d011543_P001	Maize	extracellular	30.56	34.59
TraesCS1A01G397200.1	Wheat	plastid	31.67	34.55
EES03406	Sorghum	cytosol, plastid	32.22	34.52
HORVU2Hr1G057870.1	Barley	cytosol	30.0	33.33
HORVU1Hr1G087630.3	Barley	mitochondrion	30.56	31.07
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	29.44	30.81
HORVU1Hr1G087600.1	Barley	plastid	31.67	30.16
HORVU3Hr1G032820.1	Barley	plastid	24.44	28.57
PGSC0003DMT400050646	Potato	cytosol	22.78	28.47
PGSC0003DMT400021236	Potato	cytosol	22.22	27.78
TraesCS2D01G153900.1	Wheat	cytosol	25.0	26.79
TraesCS3A01G163500.1	Wheat	plastid	23.89	25.6

Protein Annotations

EntrezGene:102595060	MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M1C3A8	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400022834	PGSC:PGSC0003DMG400022834
EnsemblPlants:PGSC0003DMT400058776	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF69	SUPFAM:SSF52833	TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sf	UniParc:UPI000295C04F	RefSeq:XP_006361069.1	SEG:seg	:	:

Description

Glutaredoxin, grx [Source:PGSC_GENE;Acc:PGSC0003DMG400022834]

Coordinates

chr10:+:4532695..4533671

Molecular Weight (calculated)

18807.3 Da

IEP (calculated)

6.773

GRAVY (calculated)

0.004

Length

180 amino acids

Sequence
(BLAST)

001: MHQTLAYRNW FPSTTTTTTT ISGSSSATTS GSSSATTSGG STNFESRSGE KKEMNYVGDM RSRYKNSFIT TSVAKSISEN AIIVVALRGC CMCHVVKNLL
101: LGLGVNPTIF EVNNEDEDDV KKELSIIVGG GGTGGGGGTT TAFPAVFVGG NLFGGLERVI STHISGELVP ILKDVGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.