Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G425500.1 | Wheat | cytosol | 94.7 | 91.91 |
| TraesCS7D01G442400.1 | Wheat | cytosol | 72.73 | 86.49 |
| TraesCS1D01G404800.1 | Wheat | cytosol | 91.67 | 83.45 |
| TraesCS1A01G397200.1 | Wheat | plastid | 94.7 | 75.76 |
| Zm00001d039011_P001 | Maize | cytosol | 71.21 | 65.28 |
| TraesCS3D01G244800.1 | Wheat | plastid | 65.91 | 63.04 |
| Zm00001d009568_P001 | Maize | cytosol | 63.64 | 62.69 |
| OQU78423 | Sorghum | cytosol, mitochondrion | 69.7 | 61.74 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 43.94 | 61.7 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 53.03 | 59.32 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 43.18 | 53.27 |
| KRH10949 | Soybean | cytosol | 51.52 | 51.13 |
| KRH20376 | Soybean | plastid | 51.52 | 50.0 |
| AT1G28480.1 | Thale cress | cytosol | 51.52 | 49.63 |
| CDX94626 | Canola | cytosol | 47.73 | 49.22 |
| TraesCS3D01G169500.1 | Wheat | cytosol | 41.67 | 49.11 |
| Bra030545.1-P | Field mustard | cytosol | 34.85 | 48.94 |
| KRH21345 | Soybean | plastid | 49.24 | 48.87 |
| CDY15662 | Canola | cytosol | 46.97 | 48.44 |
| CDY30815 | Canola | cytosol | 46.21 | 47.66 |
| Bra030102.1-P | Field mustard | cytosol | 48.48 | 47.06 |
| VIT_12s0028g03010.t01 | Wine grape | cytosol | 50.0 | 46.81 |
| Solyc10g008150.1.1 | Tomato | cytosol | 38.64 | 46.79 |
| CDY34097 | Canola | cytosol | 47.73 | 45.99 |
| Bra032911.1-P | Field mustard | cytosol | 47.73 | 45.99 |
| VIT_10s0003g00390.t01 | Wine grape | cytosol | 49.24 | 43.33 |
| Solyc10g008930.1.1 | Tomato | cytosol | 40.91 | 42.52 |
| PGSC0003DMT400024317 | Potato | plastid | 47.73 | 42.0 |
| KRH26996 | Soybean | mitochondrion | 50.76 | 41.88 |
| Solyc07g053550.1.1 | Tomato | cytosol | 46.21 | 41.22 |
| PGSC0003DMT400056253 | Potato | plastid | 42.42 | 38.89 |
| KRH22331 | Soybean | mitochondrion | 50.76 | 38.51 |
| KRH25663 | Soybean | cytosol, plastid | 50.0 | 38.15 |
| KRH55866 | Soybean | cytosol, plastid | 48.48 | 37.21 |
| VIT_00s0199g00290.t01 | Wine grape | extracellular | 31.06 | 34.45 |
| TraesCS3D01G107400.1 | Wheat | cytosol | 31.06 | 34.17 |
| TraesCS2D01G153900.1 | Wheat | cytosol | 43.18 | 33.93 |
| CDY18190 | Canola | plastid | 37.88 | 32.26 |
| Solyc02g077580.1.1 | Tomato | cytosol, plastid | 34.85 | 32.17 |
| Bra032540.1-P | Field mustard | plastid | 37.12 | 31.82 |
| CDY10096 | Canola | plastid | 37.12 | 31.82 |
| CDY32516 | Canola | plastid | 37.12 | 31.82 |
| Bra015272.1-P | Field mustard | plastid | 37.12 | 31.61 |
| PGSC0003DMT400058776 | Potato | plastid | 42.42 | 31.11 |
| CDX89861 | Canola | plastid | 36.36 | 30.97 |
| AT1G03850.1 | Thale cress | cytosol | 33.33 | 27.67 |
| CDY44992 | Canola | cytosol | 37.12 | 25.39 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G405200.1 | EnsemblPlantsGene:TraesCS1D01G405200 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:GlrX-like_pln_2 |
| InterPro:Glutaredoxin | InterPro:IPR002109 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF199 | PFAM:PF00462 |
| PFscan:PS51354 | SEG:seg | SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | MapMan:18.8.2 | : |
Description
No Description!
Coordinates
chr1D:-:469814883..469815305
Molecular Weight (calculated)
13707.7 Da
IEP (calculated)
6.783
GRAVY (calculated)
0.320
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQAIPYSAG RLPAWPRRSE PAEVVGAAGQ ESRRAGDGGE AVRRAVAESP VLVVGRRGCC LSHVVERLLQ GLGVNPAVHE VADEAELAAA AVVALPAVFV
101: GGRLLGGLDR LMAVHISGEL VPILKDAGAL WL
101: GGRLLGGLDR LMAVHISGEL VPILKDAGAL WL
001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
Arabidopsis Description
GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.