Factsheet for GSMUA_Achr6P27020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P08110_001
GSMUA_Achr2P16670_001
GSMUA_Achr3P25020_001
GSMUA_Achr3P25880_001
GSMUA_Achr4P00500_001
GSMUA_Achr6P00950_001
GSMUA_Achr6P02720_001
GSMUA_Achr6P25560_001
GSMUA_Achr7P09190_001
GSMUA_Achr7P17990_001
GSMUA_Achr7P20990_001
GSMUA_Achr8P05490_001
GSMUA_Achr8P05800_001
GSMUA_Achr9P08680_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	GSMUA_Achr10P...	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr2P08110_001	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr6P25560_001	AT4G09570.1	19130088
AT1G03850.1	GSMUA_Achr9P08680_001	AT4G09570.1	19130088
AT1G28480.1	GSMUA_Achr2P16670_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr3P25880_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr6P00950_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr7P09190_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr8P05490_001	AT1G64280.1	17397508
AT1G28480.1	GSMUA_AchrUn_...	AT1G64280.1	17397508
AT1G28480.1	GSMUA_Achr4P00500_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr6P02720_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr7P17990_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr7P20990_001	AT3G47620.1	21798944
AT1G28480.1	GSMUA_Achr10P...	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr11P...	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr3P25020_001	AT5G06960.1	21798944
AT1G28480.1	GSMUA_Achr8P05800_001	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	75.53	66.36
TraesCS5A01G096900.1	Wheat	cytosol	57.45	56.84
TraesCS7D01G442400.1	Wheat	cytosol	63.83	54.05
GSMUA_Achr3P15490_001	Banana	plastid	64.89	51.69
GSMUA_Achr10P...	Banana	cytosol	65.96	50.82
Bra030545.1-P	Field mustard	cytosol	47.87	47.87
Solyc10g008150.1.1	Tomato	cytosol	51.06	44.04
Zm00001d009568_P001	Maize	cytosol	62.77	44.03
TraesCS1D01G405200.1	Wheat	plastid	61.7	43.94
TraesCS3B01G272600.1	Wheat	plastid	62.77	43.07
TraesCS1A01G396900.1	Wheat	cytosol	64.89	42.07
TraesCS3D01G244800.1	Wheat	plastid	61.7	42.03
TraesCS3A01G246700.1	Wheat	plastid	61.7	42.03
TraesCS1B01G425500.1	Wheat	cytosol	60.64	41.91
HORVU3Hr1G061080.1	Barley	plastid	61.7	41.73
TraesCS1B01G425200.1	Wheat	plastid	63.83	41.67
TraesCS1D01G404800.1	Wheat	cytosol	63.83	41.38
GSMUA_Achr7P10990_001	Banana	cytosol	63.83	41.1
OQU78423	Sorghum	cytosol, mitochondrion	64.89	40.94
Os01t0667900-01	Rice	cytosol	63.83	40.82
TraesCS3A01G147400.1	Wheat	cytosol, plastid	60.64	40.43
TraesCS6B01G132800.1	Wheat	cytosol	59.57	40.0
KRH20376	Soybean	plastid	57.45	39.71
HORVU1Hr1G092260.1	Barley	mitochondrion	63.83	39.47
TraesCS5A01G064100.1	Wheat	cytosol	57.45	39.13
KRH21345	Soybean	plastid	55.32	39.1
CDY30815	Canola	cytosol	53.19	39.06
AT1G28480.1	Thale cress	cytosol	56.38	38.69
VIT_12s0028g03010.t01	Wine grape	cytosol	57.45	38.3
CDY15662	Canola	cytosol	52.13	38.28
CDX94626	Canola	cytosol	52.13	38.28
Bra030102.1-P	Field mustard	cytosol	55.32	38.24
Zm00001d039011_P001	Maize	cytosol	58.51	38.19
Zm00001d011543_P001	Maize	extracellular	63.83	37.74
Zm00001d043932_P001	Maize	cytosol	63.83	37.74
KRH10949	Soybean	cytosol	53.19	37.59
TraesCS4A01G254400.1	Wheat	plastid	55.32	37.41
Bra032911.1-P	Field mustard	cytosol	54.26	37.23
CDY34097	Canola	cytosol	54.26	37.23
TraesCS2A01G232700.1	Wheat	cytosol	53.19	36.76
TraesCS4A01G254500.1	Wheat	plastid	57.45	36.73
Solyc10g008930.1.1	Tomato	cytosol	48.94	36.22
HORVU2Hr1G057870.1	Barley	cytosol	60.64	35.19
EES03406	Sorghum	cytosol, plastid	62.77	35.12
GSMUA_Achr7P13560_001	Banana	cytosol	41.49	34.82
VIT_10s0003g00390.t01	Wine grape	cytosol	55.32	34.67
TraesCS1A01G397200.1	Wheat	plastid	60.64	34.55
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	62.77	34.3
PGSC0003DMT400056253	Potato	plastid	52.13	34.03
Solyc07g053550.1.1	Tomato	cytosol	52.13	33.11
PGSC0003DMT400024317	Potato	plastid	52.13	32.67
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	42.55	32.52
HORVU1Hr1G087600.1	Barley	plastid	64.89	32.28
HORVU1Hr1G087630.3	Barley	mitochondrion	60.64	32.2
HORVU3Hr1G065250.1	Barley	plastid	57.45	32.14
KRH26996	Soybean	mitochondrion	54.26	31.88
GSMUA_Achr10P...	Banana	mitochondrion	41.49	31.2
Solyc02g077580.1.1	Tomato	cytosol, plastid	46.81	30.77
KRH22331	Soybean	mitochondrion	54.26	29.31
CDY18190	Canola	plastid	46.81	28.39
CDY32516	Canola	plastid	45.74	27.92
CDY10096	Canola	plastid	45.74	27.92
Bra032540.1-P	Field mustard	plastid	45.74	27.92
KRH25663	Soybean	cytosol, plastid	51.06	27.75
CDX89861	Canola	plastid	45.74	27.74
Bra015272.1-P	Field mustard	plastid	45.74	27.74
KRH55866	Soybean	cytosol, plastid	50.0	27.33
PGSC0003DMT400058776	Potato	plastid	48.94	25.56
VIT_00s0199g00290.t01	Wine grape	extracellular	31.91	25.21
AT1G03850.1	Thale cress	cytosol	39.36	23.27
CDY44992	Canola	cytosol	45.74	22.28

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G27020_001	EnsemblPlants:GSMUA_Achr6P27020_001
EnsemblPlants:GSMUA_Achr6T27020_001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0TAJ7	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF111	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI00029542F1	SEG:seg	:	:	:	:

Description

Monothiol glutaredoxin-S5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G27020_001]

Coordinates

chr6:+:27639170..27639454

Molecular Weight (calculated)

9957.5 Da

IEP (calculated)

5.665

GRAVY (calculated)

0.563

Length

94 amino acids

Sequence
(BLAST)

1: MVAENPVVVV GRRGCCMCHV ARRLLQGLGV NPALCELGEE AAEFEVAGGD LRRPDMLPVV FVGGRLLGGI DRLVAVHITG ELVPILKDAG ALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.