Factsheet for GSMUA_Achr5P06460_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P13560_001	Banana	cytosol	69.11	75.89
GSMUA_Achr10P...	Banana	mitochondrion	76.42	75.2
Zm00001d008843_P001	Maize	cytosol	60.16	61.67
Os01t0194600-02	Rice	cytosol	60.16	59.2
Zm00001d039468_P001	Maize	cytosol	57.72	59.17
TraesCS3B01G123700.1	Wheat	cytosol	56.1	57.5
TraesCS3A01G105300.1	Wheat	cytosol	56.1	57.5
TraesCS3D01G107400.1	Wheat	cytosol	56.1	57.5
EES02308	Sorghum	cytosol	55.28	56.67
Zm00001d037757_P001	Maize	cytosol	56.1	56.56
Bra006132.1-P	Field mustard	extracellular	29.27	50.7
Os05t0198200-00	Rice	cytosol	53.66	47.83
EES17851	Sorghum	cytosol	52.03	43.84
GSMUA_Achr6P27020_001	Banana	cytosol	32.52	42.55
Solyc08g062970.1.1	Tomato	cytosol	45.53	40.29
Solyc11g069940.1.1	Tomato	cytosol	45.53	39.44
VIT_04s0008g01120.t01	Wine grape	cytosol	43.9	39.42
PGSC0003DMT400050646	Potato	cytosol	43.9	37.5
PGSC0003DMT400021236	Potato	cytosol	43.09	36.81
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	31.71	36.45
CDX70434	Canola	cytosol, plastid	41.46	36.43
CDX69718	Canola	cytosol, plastid	41.46	36.43
CDX97156	Canola	cytosol, plastid	41.46	36.43
CDX72386	Canola	cytosol	41.46	36.17
GSMUA_Achr10P...	Banana	cytosol	35.77	36.07
CDX78456	Canola	plastid	40.65	35.71
Bra008925.1-P	Field mustard	cytosol, plastid	40.65	35.71
CDY13515	Canola	cytosol	40.65	35.46
Bra037028.1-P	Field mustard	cytosol	40.65	35.46
CDX68934	Canola	cytosol	41.46	35.42
Bra011408.1-P	Field mustard	cytosol	40.65	34.97
CDX75319	Canola	cytosol	40.65	34.72
AT4G33040.1	Thale cress	cytosol	40.65	34.72
KRH61512	Soybean	cytosol	38.21	34.56
KRH15571	Soybean	cytosol	39.02	34.04
GSMUA_Achr3P15490_001	Banana	plastid	32.52	33.9
KRH52204	Soybean	cytosol	38.21	33.57
GSMUA_Achr7P10990_001	Banana	cytosol	39.84	33.56
AT5G11930.1	Thale cress	cytosol, plastid	39.84	33.11
KRH05438	Soybean	cytosol	39.02	32.65
CDY45025	Canola	cytosol	37.4	31.94
CDY28280	Canola	cytosol	37.4	31.94
Bra034545.1-P	Field mustard	cytosol	37.4	31.94
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	34.96	25.0

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G06460_001	EnsemblPlants:GSMUA_Achr5P06460_001
EnsemblPlants:GSMUA_Achr5T06460_001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0SW75	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF114	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI000296CDD0	SEG:seg	:	:	:	:

Description

Monothiol glutaredoxin-S2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G06460_001]

Coordinates

chr5:-:4731174..4731852

Molecular Weight (calculated)

12480.4 Da

IEP (calculated)

6.785

GRAVY (calculated)

0.368

Length

123 amino acids

Sequence
(BLAST)

001: MAAVAAMAGG RRRGAVGLSI DGAEEAPEER VGRLIRENPV VIFSRRGCCM SHVMKRLLAA VGAHPAAIEL EEADEEAAAA AAGGAGLPTL FVGGAAVGGL
101: EGLMSLHLRG RLVPMLLEAG AVR

Best Arabidopsis Sequence Match ( AT5G11930.1 )
(BLAST)

001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA

Arabidopsis Description

GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.