Factsheet for Solyc11g069940.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050646	Potato	cytosol	87.32	86.11
Bra006132.1-P	Field mustard	extracellular	33.8	67.61
VIT_04s0008g01120.t01	Wine grape	cytosol	61.27	63.5
Solyc08g062970.1.1	Tomato	cytosol	57.75	58.99
KRH15571	Soybean	cytosol	56.34	56.74
KRH05438	Soybean	cytosol	54.93	53.06
CDX70434	Canola	cytosol, plastid	50.0	50.71
CDX78456	Canola	plastid	49.3	50.0
KRH61512	Soybean	cytosol	47.89	50.0
CDX69718	Canola	cytosol, plastid	47.89	48.57
CDX97156	Canola	cytosol, plastid	47.89	48.57
Zm00001d008843_P001	Maize	cytosol	40.85	48.33
Bra011408.1-P	Field mustard	cytosol	48.59	48.25
CDX68934	Canola	cytosol	48.59	47.92
AT4G33040.1	Thale cress	cytosol	48.59	47.92
Bra008925.1-P	Field mustard	cytosol, plastid	47.18	47.86
GSMUA_Achr7P13560_001	Banana	cytosol	37.32	47.32
CDX72386	Canola	cytosol	46.48	46.81
CDX75319	Canola	cytosol	47.18	46.53
CDY13515	Canola	cytosol	45.77	46.1
Bra037028.1-P	Field mustard	cytosol	45.77	46.1
AT5G11930.1	Thale cress	cytosol, plastid	47.89	45.95
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	39.44	45.53
CDY28280	Canola	cytosol	45.77	45.14
Zm00001d039468_P001	Maize	cytosol	38.03	45.0
Bra034545.1-P	Field mustard	cytosol	45.07	44.44
EES02308	Sorghum	cytosol	37.32	44.17
TraesCS3D01G107400.1	Wheat	cytosol	37.32	44.17
TraesCS3A01G105300.1	Wheat	cytosol	37.32	44.17
TraesCS3B01G123700.1	Wheat	cytosol	37.32	44.17
CDY45025	Canola	cytosol	44.37	43.75
Zm00001d037757_P001	Maize	cytosol	36.62	42.62
GSMUA_Achr10P...	Banana	mitochondrion	37.32	42.4
Os01t0194600-02	Rice	cytosol	36.62	41.6
Os05t0198200-00	Rice	cytosol	40.14	41.3
KRH52204	Soybean	cytosol	40.14	40.71
EES17851	Sorghum	cytosol	39.44	38.36
Solyc10g008150.1.1	Tomato	cytosol	25.35	33.03
Solyc10g008930.1.1	Tomato	cytosol	25.35	28.35
Solyc02g077580.1.1	Tomato	cytosol, plastid	23.94	23.78
Solyc07g053550.1.1	Tomato	cytosol	23.94	22.97

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:IPR002109	UniProt:K4DAF0	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF56
SUPFAM:SSF52833	EnsemblPlantsGene:Solyc11g069940.1	EnsemblPlants:Solyc11g069940.1.1	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI00027693E9
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:54539246..54539674

Molecular Weight (calculated)

14982.4 Da

IEP (calculated)

4.578

GRAVY (calculated)

0.290

Length

142 amino acids

Sequence
(BLAST)

001: MQGVRRYSPL TDGGGVTLEL TTTTNSPLAI DVTESTEMRI RRLITENPVV IFTRSGCCMC HVMKRLLLSA VSVHPTVIQL EEEEIAALPA GAGDGAEDGG
101: EMPAMYIGGT RVGGFESLVA LHLSGGLVPK LVEVGAITEM VL

Best Arabidopsis Sequence Match ( AT4G33040.1 )
(BLAST)

001: MMQELGLQRF SNDVVRLDLT PPSQTSSTSL SIDEEESTEA KIRRLISEHP VIIFSRSSCC MCHVMKRLLA TIGVIPTVIE LDDHEVSSLP TALQDEYSGG
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV

Arabidopsis Description

GRXC6Glutaredoxin-C6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.