CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97156	Canola	cytosol, plastid	100.0	100.0
Bra008925.1-P	Field mustard	cytosol, plastid	98.57	98.57
CDX70434	Canola	cytosol, plastid	80.0	80.0
CDX78456	Canola	plastid	78.57	78.57
AT5G11930.1	Thale cress	cytosol, plastid	75.71	71.62
CDX72386	Canola	cytosol	57.86	57.45
CDX68934	Canola	cytosol	57.86	56.25
VIT_04s0008g01120.t01	Wine grape	cytosol	55.0	56.2
CDY13515	Canola	cytosol	56.43	56.03
CDY45025	Canola	cytosol	57.14	55.56
CDY28280	Canola	cytosol	57.14	55.56
CDX75319	Canola	cytosol	57.14	55.56
Solyc08g062970.1.1	Tomato	cytosol	49.29	49.64
Solyc11g069940.1.1	Tomato	cytosol	48.57	47.89
TraesCS3D01G107400.1	Wheat	cytosol	38.57	45.0
TraesCS3B01G123700.1	Wheat	cytosol	38.57	45.0
TraesCS3A01G105300.1	Wheat	cytosol	38.57	45.0
GSMUA_Achr7P13560_001	Banana	cytosol	35.71	44.64
PGSC0003DMT400021236	Potato	cytosol	45.71	44.44
Zm00001d008843_P001	Maize	cytosol	37.86	44.17
PGSC0003DMT400050646	Potato	cytosol	45.0	43.75
Zm00001d039468_P001	Maize	cytosol	36.43	42.5
EES02308	Sorghum	cytosol	36.43	42.5
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	36.43	41.46
Zm00001d037757_P001	Maize	cytosol	35.71	40.98
EES17851	Sorghum	cytosol	42.14	40.41
Os05t0198200-00	Rice	cytosol	39.29	39.86
GSMUA_Achr10P...	Banana	mitochondrion	35.0	39.2
Os01t0194600-02	Rice	cytosol	34.29	38.4
CDY30815	Canola	cytosol	29.29	32.03
CDX94626	Canola	cytosol	29.29	32.03
CDY34097	Canola	cytosol	30.71	31.39
CDY15662	Canola	cytosol	28.57	31.25
CDX89861	Canola	plastid	32.14	29.03
CDY18190	Canola	plastid	32.14	29.03
CDY32516	Canola	plastid	31.43	28.57
CDY10096	Canola	plastid	31.43	28.57
CDY44992	Canola	cytosol	31.43	22.8

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:A0A078E7G9	EnsemblPlants:CDX69718	ProteinID:CDX69718	ProteinID:CDX69718.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00135751001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF178	SUPFAM:SSF52833	TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EC8078	SEG:seg	:	:	:

Description

BnaA10g20670D

Coordinates

chrLK031790:+:1516745..1517167

Molecular Weight (calculated)

15008.1 Da

IEP (calculated)

4.564

GRAVY (calculated)

0.311

Length

140 amino acids

Sequence
(BLAST)

001: MKKMQGLWNF PNDDVSVDLT VPPTAPPPLS SSTASTSLSF DEEETSESKI ERLISEHPVL IFTRSSSCCM CHVMKKLLST VGVHPTVIEV DEEEIACLAV
101: QTAPVLFIGG ACVGGFESLV ALHLSGHLVS RLVEVGALWA

Best Arabidopsis Sequence Match ( AT5G11930.1 )
(BLAST)

001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA

Arabidopsis Description

GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.