Factsheet for Bra008925.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97156	Canola	cytosol, plastid	98.57	98.57
CDX69718	Canola	cytosol, plastid	98.57	98.57
Bra006132.1-P	Field mustard	extracellular	46.43	91.55
AT5G11930.1	Thale cress	cytosol, plastid	75.0	70.95
Bra011408.1-P	Field mustard	cytosol	57.14	55.94
VIT_04s0008g01120.t01	Wine grape	cytosol	54.29	55.47
Bra037028.1-P	Field mustard	cytosol	55.71	55.32
Bra034545.1-P	Field mustard	cytosol	55.0	53.47
Solyc08g062970.1.1	Tomato	cytosol	48.57	48.92
Solyc11g069940.1.1	Tomato	cytosol	47.86	47.18
TraesCS3D01G107400.1	Wheat	cytosol	37.86	44.17
TraesCS3B01G123700.1	Wheat	cytosol	37.86	44.17
TraesCS3A01G105300.1	Wheat	cytosol	37.86	44.17
GSMUA_Achr7P13560_001	Banana	cytosol	35.0	43.75
PGSC0003DMT400021236	Potato	cytosol	45.0	43.75
Zm00001d008843_P001	Maize	cytosol	37.14	43.33
PGSC0003DMT400050646	Potato	cytosol	44.29	43.06
Bra030545.1-P	Field mustard	cytosol	28.57	42.55
Zm00001d039468_P001	Maize	cytosol	35.71	41.67
EES02308	Sorghum	cytosol	35.71	41.67
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	35.71	40.65
Zm00001d037757_P001	Maize	cytosol	35.0	40.16
EES17851	Sorghum	cytosol	41.43	39.73
GSMUA_Achr10P...	Banana	mitochondrion	35.0	39.2
Os05t0198200-00	Rice	cytosol	38.57	39.13
Os01t0194600-02	Rice	cytosol	33.57	37.6
Bra032911.1-P	Field mustard	cytosol	30.0	30.66
Bra030102.1-P	Field mustard	cytosol	29.29	30.15
Bra015272.1-P	Field mustard	plastid	31.43	28.39
Bra032540.1-P	Field mustard	plastid	30.71	27.92

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra008925	EnsemblPlants:Bra008925.1	EnsemblPlants:Bra008925.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CXH8	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF178	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI0002543F10	SEG:seg	:	:	:	:

Description

AT5G11930 (E=6e-046) | glutaredoxin family protein

Coordinates

chrA10:+:14445569..14445991

Molecular Weight (calculated)

14932.0 Da

IEP (calculated)

4.681

GRAVY (calculated)

0.362

Length

140 amino acids

Sequence
(BLAST)

001: MKKMQGLWNF PNDDVSVDLT VPPTAPPPLS SSTASTSLSF DEEETSESKI ARLISEHPVL IFTRSSSCCL CHVMKKLLST VGVHPTVIEV DEEEIACLAV
101: QTAPVLFIGG ACVGGFESLV ALHLSGHLVS RLVEVGALWA

Best Arabidopsis Sequence Match ( AT5G11930.1 )
(BLAST)

001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA

Arabidopsis Description

GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.