Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006132.1-P | Field mustard | extracellular | 43.24 | 90.14 |
| CDX70434 | Canola | cytosol, plastid | 77.7 | 82.14 |
| CDX78456 | Canola | plastid | 76.35 | 80.71 |
| CDX69718 | Canola | cytosol, plastid | 71.62 | 75.71 |
| CDX97156 | Canola | cytosol, plastid | 71.62 | 75.71 |
| Bra008925.1-P | Field mustard | cytosol, plastid | 70.95 | 75.0 |
| VIT_04s0008g01120.t01 | Wine grape | cytosol | 52.7 | 56.93 |
| AT4G33040.1 | Thale cress | cytosol | 54.73 | 56.25 |
| Solyc08g062970.1.1 | Tomato | cytosol | 47.3 | 50.36 |
| Solyc11g069940.1.1 | Tomato | cytosol | 45.95 | 47.89 |
| GSMUA_Achr7P13560_001 | Banana | cytosol | 33.78 | 44.64 |
| PGSC0003DMT400050646 | Potato | cytosol | 43.24 | 44.44 |
| PGSC0003DMT400021236 | Potato | cytosol | 43.24 | 44.44 |
| TraesCS3D01G107400.1 | Wheat | cytosol | 35.81 | 44.17 |
| TraesCS3B01G123700.1 | Wheat | cytosol | 35.81 | 44.17 |
| TraesCS3A01G105300.1 | Wheat | cytosol | 35.81 | 44.17 |
| EES02308 | Sorghum | cytosol | 35.14 | 43.33 |
| Zm00001d008843_P001 | Maize | cytosol | 35.14 | 43.33 |
| Zm00001d039468_P001 | Maize | cytosol | 33.78 | 41.67 |
| Zm00001d037757_P001 | Maize | cytosol | 33.78 | 40.98 |
| Os01t0194600-02 | Rice | cytosol | 33.78 | 40.0 |
| Os05t0198200-00 | Rice | cytosol | 37.16 | 39.86 |
| GSMUA_Achr5P06460_001 | Banana | cytosol, mitochondrion | 33.11 | 39.84 |
| EES17851 | Sorghum | cytosol | 38.51 | 39.04 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.76 | 37.6 |
| AT1G28480.1 | Thale cress | cytosol | 29.05 | 31.39 |
| AT1G03850.1 | Thale cress | cytosol | 24.32 | 22.64 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EntrezGene:831066 | ProteinID:AED91741.1 | ArrayExpress:AT5G11930 | EnsemblPlantsGene:AT5G11930 |
| RefSeq:AT5G11930 | TAIR:AT5G11930 | RefSeq:AT5G11930-TAIR-G | EnsemblPlants:AT5G11930.1 | TAIR:AT5G11930.1 | Unigene:At.49741 |
| EMBL:BT024765 | ProteinID:CAB87666.1 | EMBL:FJ611919 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 |
| GO:GO:0055114 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:IPR002109 | RefSeq:NP_196754.2 | PFAM:PF00462 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0025022 |
| PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF178 | UniProt:Q29PZ1 | SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI000034F380 | SEG:seg | : | : | : |
Description
GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
Coordinates
chr5:-:3844940..3845711
Molecular Weight (calculated)
15710.1 Da
IEP (calculated)
5.114
GRAVY (calculated)
0.311
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.