Factsheet for Zm00001d039468_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008843_P001	Maize	cytosol	93.33	93.33
EES02308	Sorghum	cytosol	81.67	81.67
TraesCS3D01G107400.1	Wheat	cytosol	75.83	75.83
TraesCS3B01G123700.1	Wheat	cytosol	75.83	75.83
TraesCS3A01G105300.1	Wheat	cytosol	75.83	75.83
Os01t0194600-02	Rice	cytosol	78.33	75.2
Zm00001d037757_P001	Maize	cytosol	74.17	72.95
GSMUA_Achr7P13560_001	Banana	cytosol	55.83	59.82
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	59.17	57.72
GSMUA_Achr10P...	Banana	mitochondrion	56.67	54.4
Bra006132.1-P	Field mustard	extracellular	30.0	50.7
VIT_04s0008g01120.t01	Wine grape	cytosol	45.83	40.15
AT4G33040.1	Thale cress	cytosol	46.67	38.89
Bra011408.1-P	Field mustard	cytosol	45.83	38.46
CDY13515	Canola	cytosol	45.0	38.3
Bra037028.1-P	Field mustard	cytosol	45.0	38.3
CDX72386	Canola	cytosol	45.0	38.3
CDX75319	Canola	cytosol	45.83	38.19
Solyc08g062970.1.1	Tomato	cytosol	44.17	38.13
Solyc11g069940.1.1	Tomato	cytosol	45.0	38.03
CDX78456	Canola	plastid	44.17	37.86
KRH15571	Soybean	cytosol	44.17	37.59
KRH61512	Soybean	cytosol	42.5	37.5
CDX68934	Canola	cytosol	45.0	37.5
CDX70434	Canola	cytosol, plastid	43.33	37.14
PGSC0003DMT400021236	Potato	cytosol	44.17	36.81
PGSC0003DMT400050646	Potato	cytosol	44.17	36.81
CDY28280	Canola	cytosol	44.17	36.81
CDX97156	Canola	cytosol, plastid	42.5	36.43
CDX69718	Canola	cytosol, plastid	42.5	36.43
CDY45025	Canola	cytosol	43.33	36.11
Bra008925.1-P	Field mustard	cytosol, plastid	41.67	35.71
Bra034545.1-P	Field mustard	cytosol	42.5	35.42
KRH05438	Soybean	cytosol	43.33	35.37
AT5G11930.1	Thale cress	cytosol, plastid	41.67	33.78
KRH52204	Soybean	cytosol	39.17	33.57
Zm00001d009568_P001	Maize	cytosol	35.83	32.09
Zm00001d039011_P001	Maize	cytosol	35.83	29.86
Zm00001d011543_P001	Maize	extracellular	37.5	28.3
Zm00001d043932_P001	Maize	cytosol	37.5	28.3

Protein Annotations

EntrezGene:100286264	MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:B6UGY1	EMBL:EU976496	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	ProteinID:ONM28907.1	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF114	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI000182FD2E	EnsemblPlantsGene:Zm00001d039468	EnsemblPlants:Zm00001d039468_P001	EnsemblPlants:Zm00001d039468_T001	SEG:seg	:

Description

Grx_A2-glutaredoxin subgroup III

Coordinates

chr3:-:5118949..5119466

Molecular Weight (calculated)

12430.3 Da

IEP (calculated)

6.246

GRAVY (calculated)

0.387

Length

120 amino acids

Sequence
(BLAST)

001: MQAVGIRRGL TIDPAGEEEA PAARVWRLVR ESPVVIFARR GCCMAHVMRR LLAAVGAHAT VIELDAGAAE EQELAAAVEG GGVPALFVGG DPVGGLEGLM
101: GLHLSGRLVP RLRELGALCA

Best Arabidopsis Sequence Match ( AT4G33040.1 )
(BLAST)

001: MMQELGLQRF SNDVVRLDLT PPSQTSSTSL SIDEEESTEA KIRRLISEHP VIIFSRSSCC MCHVMKRLLA TIGVIPTVIE LDDHEVSSLP TALQDEYSGG
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV

Arabidopsis Description

GRXC6Glutaredoxin-C6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.