CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05438	Soybean	cytosol	89.36	85.71
KRH61512	Soybean	cytosol	68.09	70.59
VIT_04s0008g01120.t01	Wine grape	cytosol	63.12	64.96
CDX68934	Canola	cytosol	65.25	63.89
AT4G33040.1	Thale cress	cytosol	65.25	63.89
Bra011408.1-P	Field mustard	cytosol	64.54	63.64
CDX75319	Canola	cytosol	63.83	62.5
Bra037028.1-P	Field mustard	cytosol	62.41	62.41
CDY13515	Canola	cytosol	61.7	61.7
CDY28280	Canola	cytosol	62.41	61.11
CDX72386	Canola	cytosol	59.57	59.57
CDY45025	Canola	cytosol	59.57	58.33
Solyc08g062970.1.1	Tomato	cytosol	57.45	58.27
Bra034545.1-P	Field mustard	cytosol	58.87	57.64
Solyc11g069940.1.1	Tomato	cytosol	56.74	56.34
KRH52204	Soybean	cytosol	55.32	55.71
PGSC0003DMT400021236	Potato	cytosol	54.61	53.47
PGSC0003DMT400050646	Potato	cytosol	52.48	51.39
Zm00001d008843_P001	Maize	cytosol	38.3	45.0
Zm00001d039468_P001	Maize	cytosol	37.59	44.17
EES02308	Sorghum	cytosol	36.88	43.33
GSMUA_Achr7P13560_001	Banana	cytosol	34.04	42.86
Zm00001d037757_P001	Maize	cytosol	36.88	42.62
TraesCS3A01G105300.1	Wheat	cytosol	35.46	41.67
TraesCS3B01G123700.1	Wheat	cytosol	35.46	41.67
TraesCS3D01G107400.1	Wheat	cytosol	35.46	41.67
Os05t0198200-00	Rice	cytosol	40.43	41.3
GSMUA_Achr10P...	Banana	mitochondrion	35.46	40.0
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	34.04	39.02
Os01t0194600-02	Rice	cytosol	34.04	38.4
EES17851	Sorghum	cytosol	37.59	36.3
KRH20376	Soybean	plastid	33.33	34.56
KRH21345	Soybean	plastid	31.21	33.08
KRH10949	Soybean	cytosol	31.21	33.08
KRH25663	Soybean	cytosol, plastid	33.33	27.17
KRH26996	Soybean	mitochondrion	29.79	26.25
KRH22331	Soybean	mitochondrion	31.91	25.86
KRH55866	Soybean	cytosol, plastid	29.08	23.84

Protein Annotations

EntrezGene:100778024	MapMan:18.8.2	Gene3D:3.40.30.10	EMBL:ACUP02008614	EnsemblPlantsGene:GLYMA_14G096700	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:Glutaredoxin_subgr	UniProt:I1M938	InterPro:IPR002109
EnsemblPlants:KRH15571	ProteinID:KRH15571	ProteinID:KRH15571.1	PFAM:PF00462	PRINTS:PR00160	PFscan:PS51257
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF56	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI000233B9B7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:9067490..9068619

Molecular Weight (calculated)

15174.3 Da

IEP (calculated)

5.884

GRAVY (calculated)

0.199

Length

141 amino acids

Sequence
(BLAST)

001: MQGLRRCSND VVQLDLSTPT TTTTTTTTTS SCSLSIDVDE STEARIQRLI SEHPVIIFTR SSCCMCHVMK KLLATIGVNP TVIELDDHEI AALPFPDNNH
101: RNPIPAVFIG GDSVGGLESL VALHVSGHLV PKLVQVGALW V

Best Arabidopsis Sequence Match ( AT4G33040.1 )
(BLAST)

001: MMQELGLQRF SNDVVRLDLT PPSQTSSTSL SIDEEESTEA KIRRLISEHP VIIFSRSSCC MCHVMKRLLA TIGVIPTVIE LDDHEVSSLP TALQDEYSGG
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV

Arabidopsis Description

GRXC6Glutaredoxin-C6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.