CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61512	Soybean	cytosol	66.43	68.38
KRH15571	Soybean	cytosol	55.71	55.32
KRH05438	Soybean	cytosol	55.71	53.06
AT4G33040.1	Thale cress	cytosol	54.29	52.78
CDX75319	Canola	cytosol	53.57	52.08
Solyc08g062970.1.1	Tomato	cytosol	51.43	51.8
Bra011408.1-P	Field mustard	cytosol	52.14	51.05
CDY28280	Canola	cytosol	52.14	50.69
CDX68934	Canola	cytosol	52.14	50.69
Bra034545.1-P	Field mustard	cytosol	52.14	50.69
VIT_04s0008g01120.t01	Wine grape	cytosol	49.29	50.37
Bra037028.1-P	Field mustard	cytosol	50.71	50.35
CDY45025	Canola	cytosol	51.43	50.0
CDY13515	Canola	cytosol	50.0	49.65
CDX72386	Canola	cytosol	50.0	49.65
PGSC0003DMT400021236	Potato	cytosol	50.71	49.31
PGSC0003DMT400050646	Potato	cytosol	45.71	44.44
GSMUA_Achr7P13560_001	Banana	cytosol	35.0	43.75
Zm00001d037757_P001	Maize	cytosol	35.71	40.98
Solyc11g069940.1.1	Tomato	cytosol	40.71	40.14
GSMUA_Achr10P...	Banana	mitochondrion	35.71	40.0
Zm00001d039468_P001	Maize	cytosol	33.57	39.17
TraesCS3A01G105300.1	Wheat	cytosol	32.86	38.33
TraesCS3B01G123700.1	Wheat	cytosol	32.86	38.33
TraesCS3D01G107400.1	Wheat	cytosol	32.86	38.33
Zm00001d008843_P001	Maize	cytosol	32.86	38.33
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	33.57	38.21
Os05t0198200-00	Rice	cytosol	36.43	36.96
EES02308	Sorghum	cytosol	31.43	36.67
Os01t0194600-02	Rice	cytosol	32.14	36.0
EES17851	Sorghum	cytosol	35.71	34.25
KRH20376	Soybean	plastid	30.0	30.88
KRH10949	Soybean	cytosol	29.29	30.83
KRH21345	Soybean	plastid	27.86	29.32
KRH26996	Soybean	mitochondrion	25.71	22.5
KRH22331	Soybean	mitochondrion	26.43	21.26
KRH55866	Soybean	cytosol, plastid	25.71	20.93
KRH25663	Soybean	cytosol, plastid	25.71	20.81

Protein Annotations

EntrezGene:100780137	MapMan:18.8.2	Gene3D:3.40.30.10	EMBL:ACUP02003411	EnsemblPlantsGene:GLYMA_06G052600	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	UniProt:I1K8D4	InterPro:IPR002109	EnsemblPlants:KRH52204
ProteinID:KRH52204	ProteinID:KRH52204.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF178
SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000233A2A9	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:3964513..3966171

Molecular Weight (calculated)

14832.1 Da

IEP (calculated)

4.487

GRAVY (calculated)

0.311

Length

140 amino acids

Sequence
(BLAST)

001: MNSTEEGMQG IGIGIGCFQN DVVGQLELSP TMSNSSSSLS MELDESPESR IQRLISEHPV IIFTRSSCCM CHVMKKLLAT IGVHPTVIEL DDQEIAALPD
101: TSAPSAFIGG TCIGGLESLV GLHVTGHLIP KLVQVGALWV

Best Arabidopsis Sequence Match ( AT4G33040.1 )
(BLAST)

001: MMQELGLQRF SNDVVRLDLT PPSQTSSTSL SIDEEESTEA KIRRLISEHP VIIFSRSSCC MCHVMKRLLA TIGVIPTVIE LDDHEVSSLP TALQDEYSGG
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV

Arabidopsis Description

GRXC6Glutaredoxin-C6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.