Factsheet for Os05t0198200-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037757_P001	Maize	cytosol	68.84	77.87
EES17851	Sorghum	cytosol	81.16	76.71
Os01t0194600-02	Rice	cytosol	58.7	64.8
GSMUA_Achr7P13560_001	Banana	cytosol	47.1	58.04
Bra006132.1-P	Field mustard	extracellular	29.71	57.75
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	47.83	53.66
GSMUA_Achr10P...	Banana	mitochondrion	44.93	49.6
VIT_04s0008g01120.t01	Wine grape	cytosol	43.48	43.8
Solyc08g062970.1.1	Tomato	cytosol	42.03	41.73
PGSC0003DMT400050646	Potato	cytosol	42.75	40.97
KRH15571	Soybean	cytosol	41.3	40.43
PGSC0003DMT400021236	Potato	cytosol	42.03	40.28
Solyc11g069940.1.1	Tomato	cytosol	41.3	40.14
CDX78456	Canola	plastid	40.58	40.0
KRH61512	Soybean	cytosol	39.13	39.71
CDX69718	Canola	cytosol, plastid	39.86	39.29
CDX70434	Canola	cytosol, plastid	39.86	39.29
CDX97156	Canola	cytosol, plastid	39.86	39.29
KRH05438	Soybean	cytosol	41.3	38.78
Bra008925.1-P	Field mustard	cytosol, plastid	39.13	38.57
CDX68934	Canola	cytosol	39.13	37.5
AT5G11930.1	Thale cress	cytosol, plastid	39.86	37.16
Bra011408.1-P	Field mustard	cytosol	38.41	37.06
AT4G33040.1	Thale cress	cytosol	38.41	36.81
Os01t0241400-01	Rice	cytosol, plastid	36.23	36.76
KRH52204	Soybean	cytosol	36.96	36.43
CDX72386	Canola	cytosol	36.96	36.17
CDX75319	Canola	cytosol	37.68	36.11
Os01t0667900-01	Rice	cytosol	38.41	36.05
CDY13515	Canola	cytosol	36.23	35.46
Bra037028.1-P	Field mustard	cytosol	36.23	35.46
CDY28280	Canola	cytosol	36.23	34.72
CDY45025	Canola	cytosol	35.51	34.03
Bra034545.1-P	Field mustard	cytosol	34.78	33.33

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	ProteinID:AAV24911.1	ProteinID:BAF16788.1	ProteinID:BAS92694.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:Glutaredoxin_subgr
InterPro:IPR002109	EnsemblPlantsGene:Os05g0198200	EnsemblPlants:Os05t0198200-00	PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF114	UniProt:Q0DK35	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI0000E12398	SEG:seg	:	:	:	:

Description

GLUTAREDOXIN 16Thioredoxin fold domain containing protein. (Os05t0198200-00)

Coordinates

chr5:+:6085887..6087017

Molecular Weight (calculated)

13557.6 Da

IEP (calculated)

6.751

GRAVY (calculated)

0.425

Length

138 amino acids

Sequence
(BLAST)

001: MQGGGGVSCA VAGDAPSSTR GGGGGGMLGL TLFDPPGGEQ PAERIGRLVR ESPVVIFARR GCCMCHVMRR LLAAVGAHAT VIELDEAAEE AAASAAAAAA
101: VPALFVGGAP VGGLDGLMGL HLSGRLVPRL REVGALCG

Best Arabidopsis Sequence Match ( AT5G11930.1 )
(BLAST)

001: MKTMRGLRNC SNDAVTLDLT VHPPPPPPLP PPAPSTVSSS TASTSLSFDE EETSESKIGR LISEHPVIIF TRFSSCCMCH VMKKLLSTVG VHPTVIEIDD
101: GEIAYLAVEA APVLFIGGTC VGGFESLVAL HLSGQLIPRL VEVGALWA

Arabidopsis Description

GRXC10Glutaredoxin-C10 [Source:UniProtKB/Swiss-Prot;Acc:Q29PZ1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.