Factsheet for Bra011408.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68934	Canola	cytosol	97.9	97.22
CDX75319	Canola	cytosol	94.41	93.75
AT4G33040.1	Thale cress	cytosol	88.11	87.5
Bra037028.1-P	Field mustard	cytosol	82.52	83.69
Bra034545.1-P	Field mustard	cytosol	82.52	81.94
KRH15571	Soybean	cytosol	63.64	64.54
Bra006132.1-P	Field mustard	extracellular	31.47	63.38
VIT_04s0008g01120.t01	Wine grape	cytosol	58.04	60.58
KRH05438	Soybean	cytosol	61.54	59.86
KRH61512	Soybean	cytosol	55.24	58.09
Bra008925.1-P	Field mustard	cytosol, plastid	55.94	57.14
Solyc08g062970.1.1	Tomato	cytosol	52.45	53.96
KRH52204	Soybean	cytosol	51.05	52.14
PGSC0003DMT400050646	Potato	cytosol	49.65	49.31
PGSC0003DMT400021236	Potato	cytosol	49.65	49.31
Solyc11g069940.1.1	Tomato	cytosol	48.25	48.59
GSMUA_Achr7P13560_001	Banana	cytosol	37.06	47.32
Zm00001d039468_P001	Maize	cytosol	38.46	45.83
Zm00001d008843_P001	Maize	cytosol	38.46	45.83
EES02308	Sorghum	cytosol	37.76	45.0
Bra030545.1-P	Field mustard	cytosol	29.37	44.68
TraesCS3D01G107400.1	Wheat	cytosol	37.06	44.17
TraesCS3B01G123700.1	Wheat	cytosol	36.36	43.33
TraesCS3A01G105300.1	Wheat	cytosol	36.36	43.33
Zm00001d037757_P001	Maize	cytosol	36.36	42.62
Os01t0194600-02	Rice	cytosol	35.66	40.8
GSMUA_Achr5P06460_001	Banana	cytosol, mitochondrion	34.97	40.65
GSMUA_Achr10P...	Banana	mitochondrion	34.27	39.2
Os05t0198200-00	Rice	cytosol	37.06	38.41
Bra032911.1-P	Field mustard	cytosol	35.66	37.23
EES17851	Sorghum	cytosol	37.06	36.3
Bra030102.1-P	Field mustard	cytosol	33.57	35.29
Bra015272.1-P	Field mustard	plastid	33.57	30.97
Bra032540.1-P	Field mustard	plastid	32.87	30.52

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra011408	EnsemblPlants:Bra011408.1	EnsemblPlants:Bra011408.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:M4D4K4
PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF56	SUPFAM:SSF52833
TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0002546065	SEG:seg	:	:

Description

AT4G33040 (E=7e-056) | glutaredoxin family protein

Coordinates

chrA01:+:2302551..2302982

Molecular Weight (calculated)

15337.6 Da

IEP (calculated)

4.598

GRAVY (calculated)

0.281

Length

143 amino acids

Sequence
(BLAST)

001: MQELGLERFS NDAVYLDLTP PSQTSSTSLS IDEEESSEAK IRRLITEHPV IIFSRSSCCM CHVMKRLLAT IGVIPTVIEL DDHEVSSLPL ALGEEYSGGG
101: SGVVPPPAVF IGRECVGGLE SLVALHLSGH LVPKLVQVGA LWV

Best Arabidopsis Sequence Match ( AT4G33040.1 )
(BLAST)

001: MMQELGLQRF SNDVVRLDLT PPSQTSSTSL SIDEEESTEA KIRRLISEHP VIIFSRSSCC MCHVMKRLLA TIGVIPTVIE LDDHEVSSLP TALQDEYSGG
101: VSVVGPPPAV FIGRECVGGL ESLVALHLSG QLVPKLVQVG ALWV

Arabidopsis Description

GRXC6Glutaredoxin-C6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.