Factsheet for Bra032540.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32516	Canola	plastid	100.0	100.0
CDY10096	Canola	plastid	99.35	99.35
Bra030545.1-P	Field mustard	cytosol	48.7	79.79
CDY44992	Canola	cytosol	98.05	78.24
Bra015272.1-P	Field mustard	plastid	74.03	73.55
AT1G03850.1	Thale cress	cytosol	56.49	54.72
Bra006132.1-P	Field mustard	extracellular	23.38	50.7
Solyc10g008150.1.1	Tomato	cytosol	32.47	45.87
GSMUA_Achr3P15490_001	Banana	plastid	35.06	45.76
GSMUA_Achr6P27020_001	Banana	cytosol	27.92	45.74
VIT_12s0028g03010.t01	Wine grape	cytosol	38.96	42.55
TraesCS5A01G096900.1	Wheat	cytosol	25.97	42.11
TraesCS7D01G442400.1	Wheat	cytosol	29.22	40.54
PGSC0003DMT400056253	Potato	plastid	37.66	40.28
Bra032911.1-P	Field mustard	cytosol	35.71	40.15
Solyc07g053550.1.1	Tomato	cytosol	38.31	39.86
Bra030102.1-P	Field mustard	cytosol	35.06	39.71
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	27.27	39.25
PGSC0003DMT400024317	Potato	plastid	37.66	38.67
GSMUA_Achr10P...	Banana	cytosol	30.52	38.52
TraesCS3B01G194500.1	Wheat	cytosol	27.27	37.5
TraesCS3D01G169500.1	Wheat	cytosol	27.27	37.5
TraesCS3B01G272600.1	Wheat	plastid	33.12	37.23
TraesCS1D01G405200.1	Wheat	plastid	31.82	37.12
TraesCS3D01G244800.1	Wheat	plastid	33.12	36.96
HORVU2Hr1G026710.1	Barley	cytosol	26.62	36.61
TraesCS3A01G246700.1	Wheat	plastid	32.47	36.23
Zm00001d039011_P001	Maize	cytosol	33.77	36.11
TraesCS1B01G425500.1	Wheat	cytosol	31.82	36.03
HORVU3Hr1G061080.1	Barley	plastid	32.47	35.97
TraesCS2B01G174000.1	Wheat	cytosol	25.97	35.71
TraesCS2A01G149100.1	Wheat	cytosol	25.97	35.71
Zm00001d009568_P001	Maize	cytosol	30.52	35.07
GSMUA_Achr7P10990_001	Banana	cytosol	33.12	34.93
TraesCS6B01G132800.1	Wheat	cytosol	31.17	34.29
OQU78423	Sorghum	cytosol, mitochondrion	33.12	34.23
TraesCS1B01G425200.1	Wheat	plastid	31.82	34.03
Os01t0667900-01	Rice	cytosol	32.47	34.01
TraesCS1A01G396900.1	Wheat	cytosol	31.82	33.79
TraesCS1D01G404800.1	Wheat	cytosol	31.82	33.79
KRH26996	Soybean	mitochondrion	35.06	33.75
KRH55866	Soybean	cytosol, plastid	37.66	33.72
KRH25663	Soybean	cytosol, plastid	37.66	33.53
HORVU1Hr1G092260.1	Barley	mitochondrion	32.47	32.89
Bra011408.1-P	Field mustard	cytosol	30.52	32.87
KRH22331	Soybean	mitochondrion	37.01	32.76
TraesCS5A01G064100.1	Wheat	cytosol	29.22	32.61
Bra037028.1-P	Field mustard	cytosol	29.22	31.91
Os01t0241400-01	Rice	cytosol, plastid	27.92	31.62
Zm00001d011543_P001	Maize	extracellular	32.47	31.45
Bra034545.1-P	Field mustard	cytosol	29.22	31.25
TraesCS3A01G147400.1	Wheat	cytosol, plastid	28.57	31.21
TraesCS2A01G232700.1	Wheat	cytosol	27.27	30.88
Bra008925.1-P	Field mustard	cytosol, plastid	27.92	30.71
Zm00001d043932_P001	Maize	cytosol	31.17	30.19
HORVU3Hr1G032820.1	Barley	plastid	29.87	29.87
EES03406	Sorghum	cytosol, plastid	32.47	29.76
TraesCS4A01G254500.1	Wheat	plastid	27.92	29.25
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	32.47	29.07
TraesCS4A01G254400.1	Wheat	plastid	25.97	28.78
TraesCS1A01G397200.1	Wheat	plastid	30.52	28.48
HORVU2Hr1G057870.1	Barley	cytosol	29.87	28.4
HORVU1Hr1G087630.3	Barley	mitochondrion	31.82	27.68
HORVU3Hr1G065250.1	Barley	plastid	29.22	26.79
TraesCS2D01G153900.1	Wheat	cytosol	28.57	26.19
TraesCS3A01G163500.1	Wheat	plastid	28.57	26.19
HORVU1Hr1G087600.1	Barley	plastid	31.82	25.93

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra032540	EnsemblPlants:Bra032540.1	EnsemblPlants:Bra032540.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4EUQ8	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF111	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI000254368D	SEG:seg	:	:	:	:

Description

AT1G03850 (E=3e-055) | glutaredoxin family protein

Coordinates

chrA09:+:36525687..36526151

Molecular Weight (calculated)

16697.3 Da

IEP (calculated)

8.755

GRAVY (calculated)

-0.164

Length

154 amino acids

Sequence
(BLAST)

001: MQKAVRPYES SWTKTIPGNS IFRPENEDKP SSSLSWLTSS PQKPSSLSIK KPNNVLVMEN AAVVFARKGC CMGHVAKRLL LTHGVNPLVV EIDEGDNNGD
101: NIIMSELGNN VISKEKLPVM FIGGKLFGGL ENLMAAHING DLGPTLRQAG ALWL

Best Arabidopsis Sequence Match ( AT1G03850.2 )
(BLAST)

001: MQKAIRPYES PWTKTVPGNS IFLLKNEDKP SSSSSSLSWL TSGSPKPTSI SNKRSSNLVV MENAVVVFAR RGCCLGHVAK RLLLTHGVNP VVVEIGEEDN
101: NNYDNIVSDK EKLPMMYIGG KLFGGLENLM AAHINGDLVP TLRQAGALWL

Arabidopsis Description

Glutaredoxin family protein [Source:TAIR;Acc:AT1G03850]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.