Factsheet for HORVU1Hr1G087630.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G032230.4
HORVU1Hr1G068220.1
HORVU2Hr1G016580.5
HORVU3Hr1G019230.6
HORVU3Hr1G042790.4
HORVU3Hr1G042830.1
HORVU3Hr1G079010.5
HORVU4Hr1G019530.1
HORVU4Hr1G052330.3
HORVU5Hr1G032550.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT1G03850.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088
AT1G28480.1	HORVU3Hr1G019230.6	AT1G64280.1	17397508
AT1G28480.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G28480.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944
AT1G28480.1	HORVU0Hr1G032230.4	AT5G06960.1	21798944
AT1G28480.1	HORVU1Hr1G068220.1	AT5G06960.1	21798944
AT1G28480.1	HORVU2Hr1G016580.5	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042790.4	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042830.1	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G079010.5	AT5G06960.1	21798944
AT1G28480.1	HORVU4Hr1G052330.3	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G442400.1	Wheat	cytosol	55.37	88.29
HORVU1Hr1G092260.1	Barley	mitochondrion	65.54	76.32
HORVU1Hr1G087600.1	Barley	plastid	69.49	65.08
HORVU2Hr1G057870.1	Barley	cytosol	58.76	64.2
Zm00001d009568_P001	Maize	cytosol	47.46	62.69
Zm00001d039011_P001	Maize	cytosol	50.28	61.81
GSMUA_Achr6P27020_001	Banana	cytosol	32.2	60.64
HORVU3Hr1G061080.1	Barley	plastid	46.33	58.99
OQU78423	Sorghum	cytosol, mitochondrion	49.15	58.39
GSMUA_Achr3P15490_001	Banana	plastid	38.42	57.63
HORVU3Hr1G065250.1	Barley	plastid	53.11	55.95
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	31.64	52.34
CDX94626	Canola	cytosol	35.03	48.44
HORVU2Hr1G026710.1	Barley	cytosol	30.51	48.21
AT1G28480.1	Thale cress	cytosol	37.29	48.18
Bra030545.1-P	Field mustard	cytosol	25.42	47.87
KRH20376	Soybean	plastid	36.72	47.79
CDY30815	Canola	cytosol	34.46	47.66
CDY15662	Canola	cytosol	34.46	47.66
KRH10949	Soybean	cytosol	35.59	47.37
VIT_12s0028g03010.t01	Wine grape	cytosol	37.29	46.81
KRH21345	Soybean	plastid	35.03	46.62
Bra030102.1-P	Field mustard	cytosol	35.59	46.32
CDY34097	Canola	cytosol	35.59	45.99
Bra032911.1-P	Field mustard	cytosol	35.59	45.99
Solyc10g008150.1.1	Tomato	cytosol	27.68	44.95
KRH26996	Soybean	mitochondrion	37.85	41.88
Solyc10g008930.1.1	Tomato	cytosol	29.94	41.73
VIT_10s0003g00390.t01	Wine grape	cytosol	34.46	40.67
PGSC0003DMT400024317	Potato	plastid	34.46	40.67
Solyc07g053550.1.1	Tomato	cytosol	33.9	40.54
PGSC0003DMT400056253	Potato	plastid	30.51	37.5
KRH22331	Soybean	mitochondrion	36.72	37.36
KRH25663	Soybean	cytosol, plastid	35.59	36.42
HORVU3Hr1G032820.1	Barley	plastid	31.64	36.36
KRH55866	Soybean	cytosol, plastid	35.03	36.05
CDY18190	Canola	plastid	28.81	32.9
Bra015272.1-P	Field mustard	plastid	28.25	32.26
VIT_00s0199g00290.t01	Wine grape	extracellular	21.47	31.93
CDY32516	Canola	plastid	27.68	31.82
Bra032540.1-P	Field mustard	plastid	27.68	31.82
CDY10096	Canola	plastid	27.68	31.82
CDX89861	Canola	plastid	27.68	31.61
Solyc02g077580.1.1	Tomato	cytosol, plastid	24.86	30.77
PGSC0003DMT400058776	Potato	plastid	31.07	30.56
AT1G03850.1	Thale cress	cytosol	25.99	28.93
CDY44992	Canola	cytosol	27.68	25.39

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A287GLZ8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU1Hr1G087630	EnsemblPlants:HORVU1Hr1G087630.3	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF199	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000B460A6A
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:539707861..539709454

Molecular Weight (calculated)

18641.6 Da

IEP (calculated)

8.138

GRAVY (calculated)

0.010

Length

177 amino acids

Sequence
(BLAST)

001: HLPPPLLYVR PRSRCSSHHG PKPHAPPRHA HRLNGVDVEM YQAAIPYSAG RLPAWPRQSE LAEVDGTAGQ EGRRAGDGGE AVRRAAAESP VLVVGRRGCC
101: LSHVVKLLLR GLGVNPAVHE VADEAELAAA VTGDEAVVAL PAVFVGGRLL GGLDRLMAVH ISGELVPILK DAGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.