Factsheet for HORVU1Hr1G087600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G032230.4
HORVU1Hr1G068220.1
HORVU2Hr1G016580.5
HORVU3Hr1G019230.6
HORVU3Hr1G042790.4
HORVU3Hr1G042830.1
HORVU3Hr1G079010.5
HORVU4Hr1G019530.1
HORVU4Hr1G052330.3
HORVU5Hr1G032550.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT1G03850.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088
AT1G28480.1	HORVU3Hr1G019230.6	AT1G64280.1	17397508
AT1G28480.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G28480.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944
AT1G28480.1	HORVU0Hr1G032230.4	AT5G06960.1	21798944
AT1G28480.1	HORVU1Hr1G068220.1	AT5G06960.1	21798944
AT1G28480.1	HORVU2Hr1G016580.5	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042790.4	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042830.1	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G079010.5	AT5G06960.1	21798944
AT1G28480.1	HORVU4Hr1G052330.3	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G396900.1	Wheat	cytosol	70.37	91.72
TraesCS1B01G425200.1	Wheat	plastid	69.31	90.97
HORVU1Hr1G092260.1	Barley	mitochondrion	66.67	82.89
HORVU2Hr1G057870.1	Barley	cytosol	64.02	74.69
HORVU1Hr1G087630.3	Barley	mitochondrion	65.08	69.49
Zm00001d039011_P001	Maize	cytosol	49.74	65.28
Zm00001d009568_P001	Maize	cytosol	46.03	64.93
GSMUA_Achr6P27020_001	Banana	cytosol	32.28	64.89
HORVU3Hr1G061080.1	Barley	plastid	47.62	64.75
OQU78423	Sorghum	cytosol, mitochondrion	49.74	63.09
HORVU3Hr1G065250.1	Barley	plastid	53.44	60.12
GSMUA_Achr3P15490_001	Banana	plastid	36.51	58.47
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	31.22	55.14
KRH10949	Soybean	cytosol	36.51	51.88
AT1G28480.1	Thale cress	cytosol	35.98	49.63
KRH21345	Soybean	plastid	34.92	49.62
KRH20376	Soybean	plastid	35.45	49.26
HORVU2Hr1G026710.1	Barley	cytosol	29.1	49.11
Bra030545.1-P	Field mustard	cytosol	24.34	48.94
CDY15662	Canola	cytosol	32.8	48.44
CDX94626	Canola	cytosol	32.8	48.44
CDY30815	Canola	cytosol	32.8	48.44
Solyc10g008150.1.1	Tomato	cytosol	27.51	47.71
Bra030102.1-P	Field mustard	cytosol	33.86	47.06
VIT_12s0028g03010.t01	Wine grape	cytosol	34.92	46.81
CDY34097	Canola	cytosol	33.86	46.72
Bra032911.1-P	Field mustard	cytosol	33.86	46.72
VIT_10s0003g00390.t01	Wine grape	cytosol	34.39	43.33
Solyc10g008930.1.1	Tomato	cytosol	29.1	43.31
KRH26996	Soybean	mitochondrion	35.98	42.5
Solyc07g053550.1.1	Tomato	cytosol	32.28	41.22
PGSC0003DMT400024317	Potato	plastid	32.28	40.67
PGSC0003DMT400056253	Potato	plastid	30.16	39.58
KRH22331	Soybean	mitochondrion	35.98	39.08
HORVU3Hr1G032820.1	Barley	plastid	31.75	38.96
KRH25663	Soybean	cytosol, plastid	34.39	37.57
KRH55866	Soybean	cytosol, plastid	33.33	36.63
VIT_00s0199g00290.t01	Wine grape	extracellular	21.16	33.61
Solyc02g077580.1.1	Tomato	cytosol, plastid	25.4	33.57
CDY18190	Canola	plastid	26.45	32.26
CDY10096	Canola	plastid	25.93	31.82
Bra032540.1-P	Field mustard	plastid	25.93	31.82
CDY32516	Canola	plastid	25.93	31.82
PGSC0003DMT400058776	Potato	plastid	30.16	31.67
Bra015272.1-P	Field mustard	plastid	25.93	31.61
CDX89861	Canola	plastid	25.4	30.97
AT1G03850.1	Thale cress	cytosol	24.34	28.93
CDY44992	Canola	cytosol	27.51	26.94

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A287GLY5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU1Hr1G087600	EnsemblPlants:HORVU1Hr1G087600.1	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF199	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000B481FE2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:539679073..539680597

Molecular Weight (calculated)

19953.0 Da

IEP (calculated)

10.504

GRAVY (calculated)

-0.102

Length

189 amino acids

Sequence
(BLAST)

001: MSSSRFIYPS SPPNPTAIAH RTTTDASKPR TRQRIARRKK TSSVHVRRPV EMYQAIPYSA GRLAAWPRRS EQAEADGAAG QEGAPARGDG GEAVRRAVAE
101: SPVLVVGRRG CCLSHVVKRL LQGLGVNPAV HEVADEAELA AAVAGDEAVV ALPAVFVGGR LLGGLDRLMA VHISGELVPI LKDAGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.