Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g00390.t01 | Wine grape | cytosol | 63.87 | 50.67 |
| VIT_12s0028g03010.t01 | Wine grape | cytosol | 44.54 | 37.59 |
| Solyc10g008930.1.1 | Tomato | cytosol | 34.45 | 32.28 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 31.93 | 32.2 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 25.21 | 31.91 |
| GSMUA_Achr10P... | Banana | cytosol | 31.93 | 31.15 |
| TraesCS1D01G405200.1 | Wheat | plastid | 34.45 | 31.06 |
| TraesCS7D01G442400.1 | Wheat | cytosol | 28.57 | 30.63 |
| TraesCS5A01G096900.1 | Wheat | cytosol | 24.37 | 30.53 |
| TraesCS1B01G425500.1 | Wheat | cytosol | 34.45 | 30.15 |
| TraesCS5A01G064100.1 | Wheat | cytosol | 34.45 | 29.71 |
| TraesCS3D01G169500.1 | Wheat | cytosol | 27.73 | 29.46 |
| TraesCS3B01G194500.1 | Wheat | cytosol | 27.73 | 29.46 |
| GSMUA_Achr7P10990_001 | Banana | cytosol | 36.13 | 29.45 |
| TraesCS2A01G232700.1 | Wheat | cytosol | 33.61 | 29.41 |
| TraesCS1B01G425200.1 | Wheat | plastid | 34.45 | 28.47 |
| TraesCS3A01G147400.1 | Wheat | cytosol, plastid | 33.61 | 28.37 |
| TraesCS1A01G396900.1 | Wheat | cytosol | 34.45 | 28.28 |
| TraesCS1D01G404800.1 | Wheat | cytosol | 34.45 | 28.28 |
| HORVU3Hr1G061080.1 | Barley | plastid | 32.77 | 28.06 |
| Os01t0667900-01 | Rice | cytosol | 34.45 | 27.89 |
| TraesCS6B01G132800.1 | Wheat | cytosol | 32.77 | 27.86 |
| PGSC0003DMT400058776 | Potato | plastid | 42.02 | 27.78 |
| TraesCS3B01G272600.1 | Wheat | plastid | 31.93 | 27.74 |
| TraesCS3D01G244800.1 | Wheat | plastid | 31.93 | 27.54 |
| TraesCS3A01G246700.1 | Wheat | plastid | 31.93 | 27.54 |
| OQU78423 | Sorghum | cytosol, mitochondrion | 34.45 | 27.52 |
| Zm00001d011543_P001 | Maize | extracellular | 35.29 | 26.42 |
| HORVU1Hr1G092260.1 | Barley | mitochondrion | 33.61 | 26.32 |
| TraesCS4A01G254500.1 | Wheat | plastid | 31.93 | 25.85 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 22.69 | 25.23 |
| TraesCS4A01G254400.1 | Wheat | plastid | 29.41 | 25.18 |
| Zm00001d043932_P001 | Maize | cytosol | 33.61 | 25.16 |
| Zm00001d039011_P001 | Maize | cytosol | 30.25 | 25.0 |
| TraesCS2A01G149100.1 | Wheat | cytosol | 23.53 | 25.0 |
| HORVU2Hr1G026710.1 | Barley | cytosol | 23.53 | 25.0 |
| TraesCS2B01G174000.1 | Wheat | cytosol | 23.53 | 25.0 |
| TraesCS1A01G397200.1 | Wheat | plastid | 34.45 | 24.85 |
| HORVU2Hr1G057870.1 | Barley | cytosol | 33.61 | 24.69 |
| Os01t0241400-01 | Rice | cytosol, plastid | 27.73 | 24.26 |
| Zm00001d009568_P001 | Maize | cytosol | 26.89 | 23.88 |
| EES03406 | Sorghum | cytosol, plastid | 31.93 | 22.62 |
| Solyc02g077580.1.1 | Tomato | cytosol, plastid | 26.89 | 22.38 |
| GSMUA_Achr2P15240_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plastid | 31.93 | 22.09 |
| VIT_04s0008g01120.t01 | Wine grape | cytosol | 25.21 | 21.9 |
| HORVU1Hr1G087630.3 | Barley | mitochondrion | 31.93 | 21.47 |
| HORVU3Hr1G032820.1 | Barley | plastid | 27.73 | 21.43 |
| HORVU1Hr1G087600.1 | Barley | plastid | 33.61 | 21.16 |
| HORVU3Hr1G065250.1 | Barley | plastid | 29.41 | 20.83 |
| TraesCS3A01G163500.1 | Wheat | plastid | 26.89 | 19.05 |
| TraesCS2D01G153900.1 | Wheat | cytosol | 26.05 | 18.45 |
Protein Annotations
| EntrezGene:104878168 | MapMan:18.8.2 | Gene3D:3.40.30.10 | EMBL:AM423280 | ProteinID:CAN73285 | ProteinID:CAN73285.1 |
| ProteinID:CCB45251 | ProteinID:CCB45251.1 | UniProt:F6GZ65 | EMBL:FN594987 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 |
| InterPro:Glutaredoxin | InterPro:IPR002109 | PFAM:PF00462 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF69 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0002108391 | ArrayExpress:VIT_00s0199g00290 | EnsemblPlantsGene:VIT_00s0199g00290 | EnsemblPlants:VIT_00s0199g00290.t01 | RefSeq:XP_010646336.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:11314311..11314727
Molecular Weight (calculated)
12487.0 Da
IEP (calculated)
4.007
GRAVY (calculated)
0.241
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQALPYWTW VPTTGGGSSV GLSSATIEPS DGPMNPGVGM KYVTCVTKMV PENAVIVFGR RECCMCHVVM GLLLGLGVNP TVFEVDEEDE AVVVNELSRV
101: IVAEDAEDGW TAAGGGSSL
101: IVAEDAEDGW TAAGGGSSL
001: MQKAIRPYES PWTKTVPGNS IFLLKNEDKP SSSSSSLSWL TSGSPKPTSI SNKRSSNLVV MENAVVVFAR RGCCLGHVAK RLLLTHGVNP VVVEIGEEDN
101: NNYDNIATPS RFEPIHGRRS QSPPSTESAG ENSVRSIHGN ESTRRVKLEE TITKSR
101: NNYDNIATPS RFEPIHGRRS QSPPSTESAG ENSVRSIHGN ESTRRVKLEE TITKSR
Arabidopsis Description
Glutaredoxin family protein [Source:TAIR;Acc:AT1G03850]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.