CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88112
EES00131
EES02530
EES03778
EES07255
EES09373
EES16732
KXG22247
KXG36997
KXG39494

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	EES09373	AT4G09570.1	19130088
AT1G03850.1	EES16732	AT4G09570.1	19130088
AT1G28480.1	EES00131	AT1G64280.1	17397508
AT1G28480.1	EER88112	AT3G47620.1	21798944
AT1G28480.1	EES07255	AT3G47620.1	21798944
AT1G28480.1	EES02530	AT5G06960.1	21798944
AT1G28480.1	EES03778	AT5G06960.1	21798944
AT1G28480.1	KXG22247	AT5G06960.1	21798944
AT1G28480.1	KXG36997	AT5G06960.1	21798944
AT1G28480.1	KXG39494	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009568_P001	Maize	cytosol	68.46	76.12
TraesCS7D01G442400.1	Wheat	cytosol	55.7	74.77
Zm00001d039011_P001	Maize	cytosol	70.47	72.92
TraesCS5A01G096900.1	Wheat	cytosol	45.64	71.58
TraesCS1D01G405200.1	Wheat	plastid	61.74	69.7
TraesCS1A01G396900.1	Wheat	cytosol	65.1	66.9
TraesCS1B01G425500.1	Wheat	cytosol	60.4	66.18
TraesCS1B01G425200.1	Wheat	plastid	63.76	65.97
TraesCS1D01G404800.1	Wheat	cytosol	63.76	65.52
GSMUA_Achr6P27020_001	Banana	cytosol	40.94	64.89
TraesCS5A01G064100.1	Wheat	cytosol	57.72	62.32
TraesCS6B01G132800.1	Wheat	cytosol	58.39	62.14
TraesCS3A01G147400.1	Wheat	cytosol, plastid	58.39	61.7
TraesCS4A01G254400.1	Wheat	plastid	57.05	61.15
TraesCS2A01G232700.1	Wheat	cytosol	55.7	61.03
TraesCS4A01G254500.1	Wheat	plastid	59.73	60.54
GSMUA_Achr3P15490_001	Banana	plastid	46.31	58.47
HORVU1Hr1G092260.1	Barley	mitochondrion	59.06	57.89
HORVU2Hr1G057870.1	Barley	cytosol	59.06	54.32
EES03406	Sorghum	cytosol, plastid	59.73	52.98
TraesCS1A01G397200.1	Wheat	plastid	58.39	52.73
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	36.91	51.4
Bra030545.1-P	Field mustard	cytosol	31.54	50.0
HORVU1Hr1G087600.1	Barley	plastid	63.09	49.74
CDX94626	Canola	cytosol	42.28	49.22
HORVU1Hr1G087630.3	Barley	mitochondrion	58.39	49.15
AT1G28480.1	Thale cress	cytosol	44.97	48.91
KRH10949	Soybean	cytosol	43.62	48.87
KRH20376	Soybean	plastid	44.3	48.53
CDY30815	Canola	cytosol	41.61	48.44
CDY15662	Canola	cytosol	41.61	48.44
VIT_12s0028g03010.t01	Wine grape	cytosol	45.64	48.23
HORVU3Hr1G065250.1	Barley	plastid	54.36	48.21
Solyc10g008150.1.1	Tomato	cytosol	34.9	47.71
Bra030102.1-P	Field mustard	cytosol	42.95	47.06
CDY34097	Canola	cytosol	42.95	46.72
Bra032911.1-P	Field mustard	cytosol	42.95	46.72
KRH21345	Soybean	plastid	41.61	46.62
Solyc10g008930.1.1	Tomato	cytosol	38.26	44.88
VIT_10s0003g00390.t01	Wine grape	cytosol	43.62	43.33
Solyc07g053550.1.1	Tomato	cytosol	42.28	42.57
KRH26996	Soybean	mitochondrion	45.64	42.5
PGSC0003DMT400024317	Potato	plastid	40.94	40.67
PGSC0003DMT400056253	Potato	plastid	38.26	39.58
KRH25663	Soybean	cytosol, plastid	44.97	38.73
KRH22331	Soybean	mitochondrion	44.3	37.93
KRH55866	Soybean	cytosol, plastid	43.62	37.79
EES02308	Sorghum	cytosol	28.86	35.83
CDY18190	Canola	plastid	36.91	35.48
EES17851	Sorghum	cytosol	34.23	34.93
Bra015272.1-P	Field mustard	plastid	36.24	34.84
VIT_00s0199g00290.t01	Wine grape	extracellular	27.52	34.45
Solyc02g077580.1.1	Tomato	cytosol, plastid	32.89	34.27
CDX89861	Canola	plastid	35.57	34.19
CDY32516	Canola	plastid	34.23	33.12
CDY10096	Canola	plastid	34.23	33.12
Bra032540.1-P	Field mustard	plastid	34.23	33.12
PGSC0003DMT400058776	Potato	plastid	39.6	32.78
AT1G03850.1	Thale cress	cytosol	29.53	27.67
CDY44992	Canola	cytosol	34.23	26.42

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A1Z5R3S6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	EnsemblPlants:OQU78423	ProteinID:OQU78423	ProteinID:OQU78423.1	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF199	EnsemblPlantsGene:SORBI_3009G232266	SUPFAM:SSF52833	TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sf	UniParc:UPI000B423F31	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:57225567..57226701

Molecular Weight (calculated)

15529.9 Da

IEP (calculated)

4.935

GRAVY (calculated)

0.244

Length

149 amino acids

Sequence
(BLAST)

001: MYQAIPYSAG RPWPQPAPAM GVEATTAAAE ERLLAAVRQQ QPAPEAEAAA REEEVRRAVA ECPVLVVGRR GCCLSHVVKR LLQGLGVNPA VHEVADAEAE
101: LAGVVDGGDV ALPAVFVGGR LLGGLDRLMA VHISGDLVPI LKDAGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.