Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g065380.2.1 | |
| Solyc11g018610.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G03850.1 | Solyc06g065380.2.1 | AT4G09570.1 | 19130088 |
| AT1G03850.1 | Solyc11g018610.1.1 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056253 | Potato | plastid | 88.07 | 66.67 |
| Bra030545.1-P | Field mustard | cytosol | 44.04 | 51.06 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 44.04 | 51.06 |
| TraesCS5A01G096900.1 | Wheat | cytosol | 43.12 | 49.47 |
| TraesCS7D01G442400.1 | Wheat | cytosol | 47.71 | 46.85 |
| Solyc07g053550.1.1 | Tomato | cytosol | 63.3 | 46.62 |
| VIT_12s0028g03010.t01 | Wine grape | cytosol | 55.96 | 43.26 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 40.37 | 41.12 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 44.04 | 40.68 |
| Solyc10g008930.1.1 | Tomato | cytosol | 46.79 | 40.16 |
| TraesCS1D01G405200.1 | Wheat | plastid | 46.79 | 38.64 |
| GSMUA_Achr10P... | Banana | cytosol | 43.12 | 38.52 |
| KRH26996 | Soybean | mitochondrion | 55.96 | 38.12 |
| TraesCS1B01G425500.1 | Wheat | cytosol | 46.79 | 37.5 |
| Zm00001d009568_P001 | Maize | cytosol | 45.87 | 37.31 |
| KRH22331 | Soybean | mitochondrion | 58.72 | 36.78 |
| TraesCS3D01G244800.1 | Wheat | plastid | 45.87 | 36.23 |
| TraesCS3A01G246700.1 | Wheat | plastid | 45.87 | 36.23 |
| TraesCS1B01G425200.1 | Wheat | plastid | 47.71 | 36.11 |
| KRH55866 | Soybean | cytosol, plastid | 56.88 | 36.05 |
| TraesCS1A01G396900.1 | Wheat | cytosol | 47.71 | 35.86 |
| TraesCS1D01G404800.1 | Wheat | cytosol | 47.71 | 35.86 |
| TraesCS6B01G132800.1 | Wheat | cytosol | 45.87 | 35.71 |
| TraesCS3B01G194500.1 | Wheat | cytosol | 36.7 | 35.71 |
| TraesCS3A01G147400.1 | Wheat | cytosol, plastid | 45.87 | 35.46 |
| HORVU3Hr1G061080.1 | Barley | plastid | 44.95 | 35.25 |
| TraesCS3B01G272600.1 | Wheat | plastid | 44.04 | 35.04 |
| OQU78423 | Sorghum | cytosol, mitochondrion | 47.71 | 34.9 |
| TraesCS3D01G169500.1 | Wheat | cytosol | 35.78 | 34.82 |
| TraesCS5A01G064100.1 | Wheat | cytosol | 44.04 | 34.78 |
| Zm00001d039011_P001 | Maize | cytosol | 45.87 | 34.72 |
| KRH25663 | Soybean | cytosol, plastid | 55.05 | 34.68 |
| TraesCS4A01G254400.1 | Wheat | plastid | 44.04 | 34.53 |
| HORVU1Hr1G092260.1 | Barley | mitochondrion | 47.71 | 34.21 |
| Os01t0667900-01 | Rice | cytosol | 45.87 | 34.01 |
| GSMUA_Achr7P10990_001 | Banana | cytosol | 44.95 | 33.56 |
| CDY18190 | Canola | plastid | 47.71 | 33.55 |
| TraesCS4A01G254500.1 | Wheat | plastid | 44.95 | 33.33 |
| Os01t0241400-01 | Rice | cytosol, plastid | 41.28 | 33.09 |
| HORVU2Hr1G026710.1 | Barley | cytosol | 33.95 | 33.04 |
| CDX89861 | Canola | plastid | 46.79 | 32.9 |
| Bra015272.1-P | Field mustard | plastid | 46.79 | 32.9 |
| CDY32516 | Canola | plastid | 45.87 | 32.47 |
| CDY10096 | Canola | plastid | 45.87 | 32.47 |
| Bra032540.1-P | Field mustard | plastid | 45.87 | 32.47 |
| TraesCS2A01G232700.1 | Wheat | cytosol | 40.37 | 32.35 |
| Zm00001d043932_P001 | Maize | cytosol | 46.79 | 32.08 |
| Zm00001d011543_P001 | Maize | extracellular | 46.79 | 32.08 |
| TraesCS2A01G149100.1 | Wheat | cytosol | 32.11 | 31.25 |
| TraesCS1A01G397200.1 | Wheat | plastid | 46.79 | 30.91 |
| HORVU2Hr1G057870.1 | Barley | cytosol | 45.87 | 30.86 |
| EES03406 | Sorghum | cytosol, plastid | 46.79 | 30.36 |
| TraesCS2B01G174000.1 | Wheat | cytosol | 31.19 | 30.36 |
| Solyc02g077580.1.1 | Tomato | cytosol, plastid | 38.53 | 29.37 |
| HORVU3Hr1G065250.1 | Barley | plastid | 44.04 | 28.57 |
| GSMUA_Achr2P15240_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plastid | 44.95 | 28.49 |
| HORVU1Hr1G087630.3 | Barley | mitochondrion | 44.95 | 27.68 |
| HORVU1Hr1G087600.1 | Barley | plastid | 47.71 | 27.51 |
| AT1G03850.1 | Thale cress | cytosol | 38.53 | 26.42 |
| CDY44992 | Canola | cytosol | 45.87 | 25.91 |
| Solyc11g069940.1.1 | Tomato | cytosol | 33.03 | 25.35 |
| HORVU3Hr1G032820.1 | Barley | plastid | 34.86 | 24.68 |
| Solyc08g062970.1.1 | Tomato | cytosol | 31.19 | 24.46 |
| TraesCS3A01G163500.1 | Wheat | plastid | 34.86 | 22.62 |
| TraesCS2D01G153900.1 | Wheat | cytosol | 32.11 | 20.83 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | UniProt:K4CXZ2 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF111 |
| SUPFAM:SSF52833 | EnsemblPlantsGene:Solyc10g008150.1 | EnsemblPlants:Solyc10g008150.1.1 | TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI000276B7A2 |
Description
No Description!
Coordinates
chr10:+:2281545..2281874
Molecular Weight (calculated)
12007.6 Da
IEP (calculated)
4.712
GRAVY (calculated)
-0.017
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTENAVIVF RRRGCCMSHV IKRLLQCLGA NPVMYDIEEK YENEAITELE DIGKSIDGGG DRREDRSLSS PLPAVFIGGE LFGGLDRIME AHISGELCPV
101: LKNAGALWL
101: LKNAGALWL
001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
Arabidopsis Description
GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.