Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 54.07 | 76.23 |
| GSMUA_Achr7P10990_001 | Banana | cytosol | 58.14 | 68.49 |
| GSMUA_Achr6P27020_001 | Banana | cytosol | 34.3 | 62.77 |
| GSMUA_Achr1P13880_001 | Banana | cytosol, extracellular | 34.88 | 56.07 |
| TraesCS3B01G194500.1 | Wheat | cytosol | 36.05 | 55.36 |
| GSMUA_Achr3P15490_001 | Banana | plastid | 37.21 | 54.24 |
| TraesCS3D01G169500.1 | Wheat | cytosol | 34.88 | 53.57 |
| Bra030545.1-P | Field mustard | cytosol | 29.07 | 53.19 |
| TraesCS2A01G149100.1 | Wheat | cytosol | 34.3 | 52.68 |
| Os01t0241400-01 | Rice | cytosol, plastid | 40.7 | 51.47 |
| TraesCS2B01G174000.1 | Wheat | cytosol | 33.14 | 50.89 |
| HORVU2Hr1G026710.1 | Barley | cytosol | 31.98 | 49.11 |
| AT1G28480.1 | Thale cress | cytosol | 38.37 | 48.18 |
| VIT_12s0028g03010.t01 | Wine grape | cytosol | 38.95 | 47.52 |
| KRH21345 | Soybean | plastid | 36.63 | 47.37 |
| CDX94626 | Canola | cytosol | 34.88 | 46.88 |
| KRH10949 | Soybean | cytosol | 36.05 | 46.62 |
| CDY30815 | Canola | cytosol | 34.3 | 46.09 |
| KRH20376 | Soybean | plastid | 36.05 | 45.59 |
| CDY15662 | Canola | cytosol | 33.72 | 45.31 |
| Solyc10g008150.1.1 | Tomato | cytosol | 28.49 | 44.95 |
| Bra030102.1-P | Field mustard | cytosol | 35.47 | 44.85 |
| CDY34097 | Canola | cytosol | 35.47 | 44.53 |
| Bra032911.1-P | Field mustard | cytosol | 35.47 | 44.53 |
| HORVU3Hr1G032820.1 | Barley | plastid | 37.79 | 42.21 |
| VIT_10s0003g00390.t01 | Wine grape | cytosol | 36.05 | 41.33 |
| Solyc07g053550.1.1 | Tomato | cytosol | 34.88 | 40.54 |
| KRH26996 | Soybean | mitochondrion | 36.63 | 39.38 |
| PGSC0003DMT400056253 | Potato | plastid | 32.56 | 38.89 |
| Solyc10g008930.1.1 | Tomato | cytosol | 28.49 | 38.58 |
| PGSC0003DMT400024317 | Potato | plastid | 33.14 | 38.0 |
| KRH22331 | Soybean | mitochondrion | 38.37 | 37.93 |
| TraesCS2D01G153900.1 | Wheat | cytosol | 36.05 | 36.9 |
| TraesCS3A01G163500.1 | Wheat | plastid | 36.05 | 36.9 |
| KRH55866 | Soybean | cytosol, plastid | 35.47 | 35.47 |
| GSMUA_Achr5P06460_001 | Banana | cytosol, mitochondrion | 25.0 | 34.96 |
| GSMUA_Achr7P13560_001 | Banana | cytosol | 22.67 | 34.82 |
| KRH25663 | Soybean | cytosol, plastid | 34.88 | 34.68 |
| Solyc02g077580.1.1 | Tomato | cytosol, plastid | 27.91 | 33.57 |
| CDX89861 | Canola | plastid | 30.23 | 33.55 |
| Bra015272.1-P | Field mustard | plastid | 30.23 | 33.55 |
| CDY18190 | Canola | plastid | 30.23 | 33.55 |
| CDY10096 | Canola | plastid | 29.65 | 33.12 |
| Bra032540.1-P | Field mustard | plastid | 29.07 | 32.47 |
| CDY32516 | Canola | plastid | 29.07 | 32.47 |
| GSMUA_Achr10P... | Banana | mitochondrion | 23.26 | 32.0 |
| VIT_00s0199g00290.t01 | Wine grape | extracellular | 22.09 | 31.93 |
| PGSC0003DMT400058776 | Potato | plastid | 30.81 | 29.44 |
| CDY44992 | Canola | cytosol | 30.23 | 26.94 |
| AT1G03850.1 | Thale cress | cytosol | 23.26 | 25.16 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr2G15240_001 | EnsemblPlants:GSMUA_Achr2P15240_001 |
| EnsemblPlants:GSMUA_Achr2T15240_001 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:IPR002109 | UniProt:M0S865 | PFscan:PS51354 |
| PANTHER:PTHR10168 | PANTHER:PTHR10168:SF120 | SUPFAM:SSF52833 | TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI0002959120 |
| SEG:seg | : | : | : | : | : |
Description
Monothiol glutaredoxin-S3 [Source:GMGC_GENE;Acc:GSMUA_Achr2G15240_001]
Coordinates
chr2:+:16605264..16606027
Molecular Weight (calculated)
18538.9 Da
IEP (calculated)
8.249
GRAVY (calculated)
0.376
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTAPLFFNT DTILGSLLSA VFVRRGWWII MMQQAIPYSS GKAWPSLSRA PEAWELKKII GGAGEIRVAV EENPVVVVGR SGCFMVHVVR RLLLGQGVNP
101: VVCEVGEDAD EAAIMASLPP EAHDERRTSA ATVTLPAVFV GGRLVGGLDR LMAVHISGEL VPILKRAGAL WL
101: VVCEVGEDAD EAAIMASLPP EAHDERRTSA ATVTLPAVFV GGRLVGGLDR LMAVHISGEL VPILKRAGAL WL
001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL
Arabidopsis Description
GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.