Factsheet for Bra030102.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
vacuole 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018126.1-P
Bra027690.1-P
Bra028713.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G28480.1	Bra027690.1-P	AT1G64280.1	17397508
AT1G28480.1	Bra018126.1-P	AT3G47620.1	21798944
AT1G28480.1	Bra028713.1-P	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15662	Canola	cytosol	86.76	92.19
AT1G28480.1	Thale cress	cytosol	67.65	67.15
Bra032911.1-P	Field mustard	cytosol	66.18	65.69
TraesCS7D01G442400.1	Wheat	cytosol	45.59	55.86
GSMUA_Achr6P27020_001	Banana	cytosol	38.24	55.32
TraesCS5A01G096900.1	Wheat	cytosol	38.24	54.74
KRH21345	Soybean	plastid	50.74	51.88
Bra030545.1-P	Field mustard	cytosol	35.29	51.06
KRH10949	Soybean	cytosol	49.26	50.38
GSMUA_Achr3P15490_001	Banana	plastid	43.38	50.0
TraesCS1D01G405200.1	Wheat	plastid	47.06	48.48
Bra006132.1-P	Field mustard	extracellular	25.0	47.89
TraesCS1B01G425500.1	Wheat	cytosol	47.79	47.79
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	36.03	45.79
KRH20376	Soybean	plastid	45.59	45.59
TraesCS1B01G425200.1	Wheat	plastid	47.79	45.14
GSMUA_Achr10P...	Banana	cytosol	40.44	45.08
TraesCS3A01G246700.1	Wheat	plastid	45.59	44.93
TraesCS3D01G244800.1	Wheat	plastid	45.59	44.93
TraesCS1D01G404800.1	Wheat	cytosol	47.79	44.83
TraesCS1A01G396900.1	Wheat	cytosol	47.79	44.83
Zm00001d009568_P001	Maize	cytosol	44.12	44.78
HORVU3Hr1G061080.1	Barley	plastid	44.85	43.88
TraesCS6B01G132800.1	Wheat	cytosol	44.85	43.57
TraesCS3B01G272600.1	Wheat	plastid	43.38	43.07
OQU78423	Sorghum	cytosol, mitochondrion	47.06	42.95
Os01t0667900-01	Rice	cytosol	46.32	42.86
TraesCS3A01G147400.1	Wheat	cytosol, plastid	44.12	42.55
Zm00001d039011_P001	Maize	cytosol	44.85	42.36
TraesCS2A01G232700.1	Wheat	cytosol	41.91	41.91
GSMUA_Achr7P10990_001	Banana	cytosol	44.12	41.1
TraesCS3B01G194500.1	Wheat	cytosol	33.82	41.07
TraesCS4A01G254400.1	Wheat	plastid	41.91	41.01
HORVU1Hr1G092260.1	Barley	mitochondrion	45.59	40.79
TraesCS5A01G064100.1	Wheat	cytosol	41.18	40.58
Zm00001d043932_P001	Maize	cytosol	47.06	40.25
TraesCS3D01G169500.1	Wheat	cytosol	33.09	40.18
HORVU2Hr1G026710.1	Barley	cytosol	33.09	40.18
Os01t0241400-01	Rice	cytosol, plastid	39.71	39.71
TraesCS4A01G254500.1	Wheat	plastid	42.65	39.46
Zm00001d011543_P001	Maize	extracellular	45.59	38.99
EES03406	Sorghum	cytosol, plastid	47.79	38.69
TraesCS2B01G174000.1	Wheat	cytosol	31.62	38.39
TraesCS1A01G397200.1	Wheat	plastid	46.32	38.18
TraesCS2A01G149100.1	Wheat	cytosol	30.88	37.5
HORVU2Hr1G057870.1	Barley	cytosol	44.12	37.04
Bra015272.1-P	Field mustard	plastid	41.18	36.13
HORVU1Hr1G087630.3	Barley	mitochondrion	46.32	35.59
GSMUA_Achr2P15240_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plastid	44.85	35.47
Bra032540.1-P	Field mustard	plastid	39.71	35.06
HORVU3Hr1G065250.1	Barley	plastid	42.65	34.52
HORVU1Hr1G087600.1	Barley	plastid	47.06	33.86
Bra011408.1-P	Field mustard	cytosol	35.29	33.57
Bra037028.1-P	Field mustard	cytosol	32.35	31.21
Bra034545.1-P	Field mustard	cytosol	32.35	30.56
Bra008925.1-P	Field mustard	cytosol, plastid	30.15	29.29
HORVU3Hr1G032820.1	Barley	plastid	33.09	29.22
TraesCS3A01G163500.1	Wheat	plastid	33.82	27.38
TraesCS2D01G153900.1	Wheat	cytosol	31.62	25.6

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra030102	EnsemblPlants:Bra030102.1	EnsemblPlants:Bra030102.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4EMT2	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF69	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI00025410B5	:	:	:	:	:

Description

AT1G28480 (E=5e-055) GRX480 | GRX480; electron carrier/ protein disulfide oxidoreductase

Coordinates

chrA07:+:6548114..6548524

Molecular Weight (calculated)

14863.6 Da

IEP (calculated)

5.777

GRAVY (calculated)

0.283

Length

136 amino acids

Sequence
(BLAST)

001: MQGTISCSRH YPMIPAAESL RPLPLRTQGN DESVRMLVEE NAVMVIGRKG CCMCIVVKRL LFGLGVNPAV LEIDEKREVE VMSELEKIGA KDGRETVMLP
101: AVYIGGVLFG GLDRVMATHI SGELVPILKE VGALWL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.