Factsheet for HORVU1Hr1G092260.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G032230.4
HORVU1Hr1G068220.1
HORVU2Hr1G016580.5
HORVU3Hr1G019230.6
HORVU3Hr1G042790.4
HORVU3Hr1G042830.1
HORVU3Hr1G079010.5
HORVU4Hr1G019530.1
HORVU4Hr1G052330.3
HORVU5Hr1G032550.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03850.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT1G03850.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088
AT1G28480.1	HORVU3Hr1G019230.6	AT1G64280.1	17397508
AT1G28480.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G28480.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944
AT1G28480.1	HORVU0Hr1G032230.4	AT5G06960.1	21798944
AT1G28480.1	HORVU1Hr1G068220.1	AT5G06960.1	21798944
AT1G28480.1	HORVU2Hr1G016580.5	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042790.4	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G042830.1	AT5G06960.1	21798944
AT1G28480.1	HORVU3Hr1G079010.5	AT5G06960.1	21798944
AT1G28480.1	HORVU4Hr1G052330.3	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G442400.1	Wheat	cytosol	67.11	91.89
HORVU2Hr1G057870.1	Barley	cytosol	74.34	69.75
HORVU1Hr1G087600.1	Barley	plastid	82.89	66.67
HORVU1Hr1G087630.3	Barley	mitochondrion	76.32	65.54
GSMUA_Achr6P27020_001	Banana	cytosol	39.47	63.83
Zm00001d009568_P001	Maize	cytosol	54.61	61.94
Zm00001d039011_P001	Maize	cytosol	57.89	61.11
HORVU3Hr1G061080.1	Barley	plastid	55.26	60.43
GSMUA_Achr3P15490_001	Banana	plastid	46.05	59.32
OQU78423	Sorghum	cytosol, mitochondrion	57.89	59.06
HORVU3Hr1G065250.1	Barley	plastid	64.47	58.33
GSMUA_Achr1P13880_001	Banana	cytosol, extracellular	38.16	54.21
KRH10949	Soybean	cytosol	45.39	51.88
KRH20376	Soybean	plastid	44.74	50.0
AT1G28480.1	Thale cress	cytosol	44.74	49.63
Bra030545.1-P	Field mustard	cytosol	30.26	48.94
HORVU2Hr1G026710.1	Barley	cytosol	35.53	48.21
KRH21345	Soybean	plastid	42.11	48.12
Solyc10g008150.1.1	Tomato	cytosol	34.21	47.71
CDY30815	Canola	cytosol	40.13	47.66
CDX94626	Canola	cytosol	40.13	47.66
CDY15662	Canola	cytosol	39.47	46.88
VIT_12s0028g03010.t01	Wine grape	cytosol	43.42	46.81
CDY34097	Canola	cytosol	41.45	45.99
Bra032911.1-P	Field mustard	cytosol	41.45	45.99
Bra030102.1-P	Field mustard	cytosol	40.79	45.59
Solyc10g008930.1.1	Tomato	cytosol	36.18	43.31
VIT_10s0003g00390.t01	Wine grape	cytosol	42.11	42.67
KRH26996	Soybean	mitochondrion	44.08	41.88
PGSC0003DMT400024317	Potato	plastid	40.79	41.33
Solyc07g053550.1.1	Tomato	cytosol	40.13	41.22
KRH22331	Soybean	mitochondrion	44.74	39.08
HORVU3Hr1G032820.1	Barley	plastid	39.47	38.96
PGSC0003DMT400056253	Potato	plastid	36.84	38.89
KRH25663	Soybean	cytosol, plastid	42.76	37.57
KRH55866	Soybean	cytosol, plastid	41.45	36.63
VIT_00s0199g00290.t01	Wine grape	extracellular	26.32	33.61
Solyc02g077580.1.1	Tomato	cytosol, plastid	31.58	33.57
CDY18190	Canola	plastid	33.55	32.9
Bra032540.1-P	Field mustard	plastid	32.89	32.47
CDY10096	Canola	plastid	32.89	32.47
CDY32516	Canola	plastid	32.89	32.47
Bra015272.1-P	Field mustard	plastid	32.89	32.26
CDX89861	Canola	plastid	32.24	31.61
PGSC0003DMT400058776	Potato	plastid	36.84	31.11
AT1G03850.1	Thale cress	cytosol	30.26	28.93
CDY44992	Canola	cytosol	33.55	26.42

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A287GRB0	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU1Hr1G092260	EnsemblPlants:HORVU1Hr1G092260.1	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF199	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000B4771FD
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:550262293..550262803

Molecular Weight (calculated)

15885.3 Da

IEP (calculated)

7.517

GRAVY (calculated)

0.179

Length

152 amino acids

Sequence
(BLAST)

001: MGLRATSLWL SLQQSRAAIP YRVGRLPAWP RRSEQAEAEG AGGQESAPAR GDGREAVRQA VAESPVLVVG RRGCCLSHVV KRLLQGLGVN PAVHEVADEA
101: ELAAAVTGDE AVVALPAVFV GGRLLGGLDR LMAVHISGEL VPILKDAGAL WL

Best Arabidopsis Sequence Match ( AT1G28480.1 )
(BLAST)

001: MQGTISCARN YNMTTTVGES LRPLSLKTQG NGERVRMVVE ENAVIVIGRR GCCMCHVVRR LLLGLGVNPA VLEIDEERED EVLSELENIG VQGGGGTVKL
101: PAVYVGGRLF GGLDRVMATH ISGELVPILK EVGALWL

Arabidopsis Description

GRXC9Glutaredoxin-C9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.